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SCNpilot_expt_1000_bf_scaffold_3408

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3408_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
Integrating conjugative element membrane protein, PFL_4702 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6I4_ALIDK
integrating conjugative element membrane protein
Integrating conjugative element membrane protein, PFL_4702 family {ECO:0000313|EMBL:AEB84293.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_3408_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(450..833)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=A1W7Y4_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH79062.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
SCNpilot_expt_1000_bf_scaffold_3408_3
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1100..1423
DNA (324bp) protein (108aa)
Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WSM3_VEREI
helix-turn-helix domain-containing protein
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABM60630.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_expt_1000_bf_scaffold_3408_4
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1423..2727
DNA (1305bp) protein (435aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] rbh
HipA domain protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WSM2_VEREI rbh
HipA domain protein {ECO:0000313|EMBL:ABM60629.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_expt_1000_bf_scaffold_3408_5
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2745..3800
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002E189BA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ERS06868.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
SCNpilot_expt_1000_bf_scaffold_3408_6
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3834..5567
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8VCE8_PSEAI rbh
Chromosome segregation protein SMC {ECO:0000313|EMBL:ETM66003.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
SMC domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_3408_7
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5554..6972
DNA (1419bp) protein (473aa)
hypothetical protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8V8T4_PSEAI rbh
UvrD/REP helicase domain protein {ECO:0000313|EMBL:ETM66004.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
SCNpilot_expt_1000_bf_scaffold_3408_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6969..7718)
DNA (750bp) protein (250aa)
Integrating conjugative element membrane protein, PFL_4697 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6I1_ALIDK rbh
integrating conjugative element membrane protein rbh
Integrating conjugative element membrane protein, PFL_4697 family {ECO:0000313|EMBL:AEB84290.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_3408_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7715..8383)
DNA (669bp) protein (223aa)
Conjugative coupling factor TraD n=4 Tax=Proteobacteria RepID=N6YBX2_9RHOO
Conjugative coupling factor TraD {ECO:0000313|EMBL:EPL63915.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
hypothetical protein
Displaying 9 items

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