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SCNpilot_expt_1000_bf_scaffold_7558

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7558_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..184)
DNA (183bp) protein (61aa)
Putative beta-oxoacyl-CoA thiolase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P604_AROAE
beta-oxoacyl-CoA thiolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_expt_1000_bf_scaffold_7558_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..626)
DNA (414bp) protein (138aa)
MaoC-like dehydratase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z5U6_9PROT
MaoC-like dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_expt_1000_bf_scaffold_7558_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(659..1099)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A909_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_expt_1000_bf_scaffold_7558_4
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1096..1380)
DNA (285bp) protein (95aa)
Transcriptional regulator, GntR family n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P605_AROAE
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAI07256.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_1000_bf_scaffold_7558_5
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1653..2144)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UX84_ALCFA
Uncharacterized protein {ECO:0000313|EMBL:EJC65273.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
SCNpilot_expt_1000_bf_scaffold_7558_6
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2544..3677
DNA (1134bp) protein (378aa)
Uncharacterized protein n=4 Tax=Burkholderia cenocepacia RepID=B4EFT1_BURCJ rbh
hypothetical protein rbh
Lipid-transfer family protein {ECO:0000313|EMBL:ERI26338.1}; TaxID=985077 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia BC7.;"
SCNpilot_expt_1000_bf_scaffold_7558_7
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3674..3973
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Burkholderia cenocepacia RepID=B4EFT0_BURCJ
hypothetical protein; K07068
Uncharacterized protein {ECO:0000313|EMBL:CAR55991.1}; TaxID=216591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656; / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315)).;"
SCNpilot_expt_1000_bf_scaffold_7558_8
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4076..4774)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000381392B
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAI07256.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_1000_bf_scaffold_7558_9
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4842..5117)
DNA (276bp) protein (92aa)
Putative branched-chain amino acid transport system protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MIM4_BORPB
branched-chain amino acid ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_expt_1000_bf_scaffold_7558_10
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5564..5722)
DNA (159bp) protein (53aa)
Inner-membrane translocator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F1E0_9BURK
Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_expt_1000_bf_scaffold_7558_11
Leishmania mexicana, Leishmania, Kinetoplastida, Eukaryota

Not on your lists

comp(5719..6648)
DNA (930bp) protein (310aa)
WGS CADB00000000 data, contig 91 (Fragment) n=1 Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) RepID=E8NHR5_LEIMU
hypothetical protein
WGS CADB00000000 data, contig 91 {ECO:0000313|EMBL:CBZ41040.1}; Flags: Fragment;; TaxID=929439 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania mexicana (strain MHOM/GT/2001/U1103).;"
SCNpilot_expt_1000_bf_scaffold_7558_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7298..7561)
DNA (264bp) protein (88aa)
Putative branched-chain amino acid transport system permease protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2X3_9RHOO
putative branched-chain amino acid transport system permease protein
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_7558_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7600..8331)
DNA (732bp) protein (244aa)
Putative branched-chain amino acid transport system permease protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P3I1_AROAE
branched-chain amino acid transport system permease; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_1000_bf_scaffold_7558_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8351..9490)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EF9570
extracellular ligand-binding receptor
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_7558_15
bacterium YEK0313, Bacteria

Not on your lists


comp(9779..10636)
DNA (858bp) protein (286aa)
30S ribosomal protein S13 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HLE4_9BRAD
Acetate operon repressor {ECO:0000313|EMBL:CEJ12049.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7558_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10800..12080
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YVM7_9RHOO
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Displaying 16 items

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