name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_199_1
unknown
|
Not on your lists |
comp(3..122)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_199_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(136..906)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNP5_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29150.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
enoyl-CoA hydratase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_199_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(968..3100)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ81_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29151.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
acyl-CoA synthetase (NDP forming)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_199_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3191..4414)
|
glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEW3_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29152.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4468..5502)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NSF8_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29153.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ABC transporter periplasmic substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_199_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5567..6580)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NL26_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29154.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
periplasmic subtsrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_199_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6687..7889)
|
Acetyl-CoA acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R0_9BRAD
rbh
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase {ECO:0000313|EMBL:CEG09057.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7926..9449)
|
paaH; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q9_9BRAD
rbh
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:EFI50547.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9697..10593
|
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q8_9BRAD
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI50546.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_199_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10880..12160
|
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BQ55_OLICM
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI05864.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12444..12731
|
putative 6-pyruvoyl tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IT94_RHOP2
|
|
SCNpilot_expt_1000_bf_scaffold_199_12
unknown
|
Not on your lists |
comp(12847..12984)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_199_13
unknown
|
Not on your lists |
comp(12994..13164)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_199_14
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14062..15510
|
UPI0003CFA841 related cluster n=1 Tax=unknown RepID=UPI0003CFA841
rbh
Uncharacterized protein {ECO:0000313|EMBL:KEC80212.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
AraC family transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_199_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15969..17195
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJL5_OLICO
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI05354.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17208..19184
|
GGDEF/EAL domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJL4_OLICO
rbh
diguanylate cyclase
rbh
GGDEF/EAL domain protein {ECO:0000313|EMBL:AEI05355.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19301..19870)
|
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V770_9BRAD
rbh
Cytochrome c class I {ECO:0000313|EMBL:EFI51080.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cytochrome c class I
|
|
SCNpilot_expt_1000_bf_scaffold_199_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19851..21146)
|
Oxidoreductase molybdopterin binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V769_9BRAD
rbh
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:EFI51079.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
molybdopterin binding oxidoreductase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_199_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21269..22282
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIE0_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28821.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
LysR family transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_199_20
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22364..22576
|
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PUP7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13397.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_199_21
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22595..23833)
|
Putative oxalate/formate antiporter n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QRM3_9BRAD
Putative oxalate/formate antiporter {ECO:0000313|EMBL:EGP06234.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
major facilitator transporter
|
|
SCNpilot_expt_1000_bf_scaffold_199_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24040..26271
|
Flagellar biosynthesis protein FlhA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEJ7_9BRAD
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EKS36753.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flhA; flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_199_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26548..26760
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLD0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29234.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_199_24
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27122..28165)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NP25_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29235.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_199_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28165..28710)
|
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJJ7_AFIFE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS29236.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
FecI-like sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_expt_1000_bf_scaffold_199_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28922..29338)
|
Flagellar export protein FliJ n=2 Tax=Oligotropha carboxidovorans RepID=B6JIH1_OLICO
fliJ; flagellar export protein FliJ
Putative flagellar export protein FliJ {ECO:0000313|EMBL:AEI05711.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29448..30773)
|
fliI; flagellum-specific ATP synthase (EC:3.6.3.14); K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
rbh
ATP synthase n=1 Tax=Afipia birgiae RepID=UPI000307DECF
Flagellum-specific ATP synthase FliI {ECO:0000313|EMBL:EGP06241.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31441..31863
|
Two-component cell cycle transcriptional regulator ctrA, winged helix family n=1 Tax=Rhodovulum sp. PH10 RepID=J6IZY6_9RHOB
cell cycle transcriptional regulator CtrA; K13584 two-component system, cell cycle response regulator CtrA
Cell cycle response regulator CtrA {ECO:0000313|EMBL:CEG09162.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_expt_1000_bf_scaffold_199_29
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32084..33274)
|
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IU93_RHOP2
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_199_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33578..34456)
|
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cheR; chemotaxis protein methyltransferase 1 (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
rbh
Chemotaxis protein methyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NP30_AFIFE
rbh
|