name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_899_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..225)
|
carbamate kinase n=1 Tax=Afipia birgiae RepID=UPI0002FC0544
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(294..1886)
|
Gamma-glutamyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLG4_9BRAD
rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:EKS41619.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Gamma-glutamyltranspeptidase protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2126..3097)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTA9_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41618.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3275..4033)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG51_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41617.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_899_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4282..5517)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJ97_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41616.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
codAb; cytosine deaminase
|
|
SCNpilot_expt_1000_bf_scaffold_899_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5644..6861
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLF9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41614.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_899_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7142..8353
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PP23_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42579.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8370..9563)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU64_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31000.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
NnrS; K07234 uncharacterized protein involved in response to NO
|
|
SCNpilot_expt_1000_bf_scaffold_899_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9672..10331)
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F97C3E
Alternative oxidase {ECO:0000313|EMBL:CEG07034.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
oxidase
|
|
SCNpilot_expt_1000_bf_scaffold_899_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10549..11253
|
Transcriptional regulator, Crp/Fnr family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3E1_9BRAD
Anaerobic regulatory protein {ECO:0000313|EMBL:CEG07033.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
nnrR; Nitrite and nitric oxide reductase transcriptional regulator (Crp/Fnr family)
|
|
SCNpilot_expt_1000_bf_scaffold_899_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11564..13834
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F07B91
rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
rbh
TonB-dependent receptor {ECO:0000313|EMBL:ADU42447.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13899..14870
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E69049
rbh
ssuA; putative sulfonate/nitrate transport system substrate-binding protein
rbh
Putative sulfonate/nitrate transport system substrate-binding protein {ECO:0000313|EMBL:CCD02317.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14867..15685
|
ABC transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI00035D4FE2
ABC transporter permease {ECO:0000313|EMBL:EPR19946.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
anion ABC transporter permease; K02050 NitT/TauT family transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_14
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15667..16419
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EF6151
rbh
anion ABC transporter ATPase; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter, nucleotide binding/ATPase protein (Anion) {ECO:0000313|EMBL:AAK89036.2}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16416..16883
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030F67F9
Uncharacterized protein {ECO:0000313|EMBL:EHH07100.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17060..17590
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030F67F9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJX85872.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_17
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17703..19088
|
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hemN; oxygen-independent coproporphyrinogen-III oxidase HemN (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
rbh
coproporphyrinogen III oxidase n=1 Tax=Afipia birgiae RepID=UPI00037B1429
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_899_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19085..19495)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030E0A2C
Uncharacterized protein {ECO:0000313|EMBL:EFI52448.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19536..20513)
|
Peptidase U32 n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV7_OLICO
rbh
peptidase U32
rbh
Peptidase U32 {ECO:0000313|EMBL:AEI07612.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20544..21521)
|
protease n=1 Tax=Afipia birgiae RepID=UPI0002F82EEA
rbh
Peptidase U32 {ECO:0000313|EMBL:AEI07613.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21512..22060)
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q130E5_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE41544.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22142..23704
|
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-]
rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD {ECO:0000313|EMBL:AEI07615.1}; EC=4.1.1.- {ECO:0000313|EMBL:AEI07615.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV4_OLICO
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_899_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23696..24724)
|
Glycine oxidase ThiO n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV3_OLICO
rbh
Thiamine biosynthesis oxidoreductase ThiO {ECO:0000313|EMBL:AEI07616.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_24
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(24890..25795)
|
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000364050A
Uncharacterized protein {ECO:0000313|EMBL:CEJ14498.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_25
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25782..26369)
|
Bll7711 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CT4_BRADU
Membrane protein {ECO:0000313|EMBL:ETR77140.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_26
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26443..27270)
|
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYD8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35004.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27479..27928
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGL0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64637.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_28
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27971..29278)
|
Voltage-gated chloride channel n=3 Tax=Oligotropha carboxidovorans RepID=B6JH96_OLICO
rbh
putative chloride channel family protein
rbh
Putative chloride channel family protein {ECO:0000313|EMBL:AEI06361.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_899_29
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30481..31347
|
UPI0003CE312E related cluster n=1 Tax=unknown RepID=UPI0003CE312E
Spore coat protein U {ECO:0000313|EMBL:ESY67540.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
Spore coat U domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_899_30
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31397..33808)
|
Fimbrial biogenesis outer membrane usher protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y820_MESOW
rbh
fimbrial biogenesis outer membrane usher protein; K07347 outer membrane usher protein
rbh
Fimbrial biogenesis outer membrane usher protein {ECO:0000313|EMBL:AEH86402.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|