name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_496_1
unknown
|
Not on your lists |
comp(3..65)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_496_2
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
172..1170
|
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037774FC
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
|
|
SCNpilot_expt_1000_bf_scaffold_496_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1179..1898
|
putative transcriptional acitvator, Baf; K03525 type III pantothenate kinase [EC:2.7.1.33]
Type III pantothenate kinase {ECO:0000255|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000255|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000255|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000255|HAMAP-Rule:MF_01274}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E738C
|
|
SCNpilot_expt_1000_bf_scaffold_496_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1895..2557
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D4AD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96415.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_496_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2573..3433)
|
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] id=12493738 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
4-hydroxybenzoate octaprenyltransferase {ECO:0000255|HAMAP-Rule:MF_01635}; EC=2.5.1.- {ECO:0000255|HAMAP-Rule:MF_01635};; 4-HB polyprenyltransferase {ECO:0000255|HAMAP-Rule:MF_01635}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_496_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3430..4005)
|
Probable chorismate pyruvate-lyase {ECO:0000255|HAMAP-Rule:MF_01632}; Short=CL {ECO:0000255|HAMAP-Rule:MF_01632};; Short=CPL {ECO:0000255|HAMAP-Rule:MF_01632};; EC=4.1.3.40 {ECO:0000255|HAMAP-Rule:MF_01632};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Probable chorismate pyruvate-lyase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=UBIC_THIDA
|
|
SCNpilot_expt_1000_bf_scaffold_496_7
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4098..4982
|
Putative uncharacterized protein n=1 Tax=uncultured beta proteobacterium RepID=Q2Z0B5_9PROT
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CAI78485.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_496_8
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4982..5992
|
TRAP-type C4-dicarboxylate transport system,large permase component n=1 Tax=uncultured beta proteobacterium RepID=Q2Z0B4_9PROT
rbh
TRAP-type C4-dicarboxylate transport system,large permase component {ECO:0000313|EMBL:CAI78486.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
periplasmic C4-dicarboxylate binding protein DctP
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_496_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6000..6479
|
Putative uncharacterized protein n=1 Tax=uncultured beta proteobacterium RepID=Q2Z0B3_9PROT
ABC transporter permease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6515..7729
|
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLI9_THIDA
rbh
TRAP dicarboxylate transporter subunit DctM
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7718..9667)
|
ATP-dependent DNA helicase RecG n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AE24D
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
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SCNpilot_expt_1000_bf_scaffold_496_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9754..10134)
|
Putative translation initiation inhibitor id=1342766 bin=GWE1_T_denit_62_9 species=uncultured beta proteobacterium genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
endoribonuclease L-PSP; K07567 TdcF protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_13
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10166..12310)
|
guanosine-3'''',5''''-bis(diphosphate) 3''''-pyrophosphohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CDB3A
Guanosine polyphosphate pyrophosphohydrolase {ECO:0000313|EMBL:CAI78491.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
|
|
SCNpilot_expt_1000_bf_scaffold_496_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12357..12560)
|
RNA polymerase, omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] id=12497816 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RNA polymerase, omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_496_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12586..13215)
|
guanylate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CFB1E
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13237..14103)
|
Putative uncharacterized protein id=1342771 bin=GWE1_T_denit_62_9 species=uncultured beta proteobacterium genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14208..15152
|
Serine/threonine protein kinase; K00924 [EC:2.7.1.-]
serine/threonine protein kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EAA5B
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_18
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15162..16070
|
Serine/threonine protein phosphatase n=1 Tax=uncultured beta proteobacterium RepID=Q2Z0A4_9PROT
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CAI78496.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
protein serine/threonine phosphatase
|
|
SCNpilot_expt_1000_bf_scaffold_496_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16129..16860
|
RNAse PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] id=12497811 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16956..17555
|
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
rbh
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilace
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLH9_THIDA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_496_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17548..18723
|
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLH8_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18880..20175
|
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWI7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91578.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_496_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20162..20710
|
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWI8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91579.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_496_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20725..22044
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363A7A3
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_25
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22007..23179)
|
cytochrome C peroxidase n=1 Tax=Methylococcus capsulatus RepID=UPI0002F580F0
cytochrome c peroxidase
Cytochrome c peroxidase family protein {ECO:0000313|EMBL:AAU91819.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
|
|
SCNpilot_expt_1000_bf_scaffold_496_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23344..24126
|
Dienelactone hydrolase family protein id=1342781 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
dienelactone hydrolase family protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24126..24764
|
GTP cyclohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B7043
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24781..25245
|
Putative uncharacterized protein id=1342784 bin=GWE1_T_denit_62_9 species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25245..26333
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E87FB
rbh
Zn-dependent hydrolase
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_496_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26366..26719
|
Putative uncharacterized protein id=1342786 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|