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SCNpilot_expt_1000_bf_scaffold_636

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_636_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219..1136
DNA (918bp) protein (306aa)
hypothetical protein id=12498693 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_636_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1192..2391
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036784C8
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_636_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2388..3314
DNA (927bp) protein (309aa)
glycosyl transferase n=1 Tax=Thiobacillus thioparus RepID=UPI000360DBE4
glycosyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_636_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3319..4452
DNA (1134bp) protein (378aa)
glycosyl transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D8262
glycosyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_636_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4505..5311
DNA (807bp) protein (269aa)
Putative uncharacterized protein id=1318124 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_636_6
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5322..6416)
DNA (1095bp) protein (365aa)
Glycosyltransferase n=1 Tax=Thauera sp. 28 RepID=N6YPH1_9RHOO rbh
Glycosyltransferase {ECO:0000313|EMBL:ENO82560.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_636_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6413..9547)
DNA (3135bp) protein (1045aa)
arylsulfatase n=1 Tax=Thiobacillus thioparus RepID=UPI000382C963
Arylsulfatase {ECO:0000313|EMBL:BAN36774.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
arylsulfatase
SCNpilot_expt_1000_bf_scaffold_636_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9550..10473)
DNA (924bp) protein (308aa)
Glycosyl transferase family 2 n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8BA81_RUBGE rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:CCF78723.1}; TaxID=1138313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
putative glycosyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_636_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10470..11267)
DNA (798bp) protein (266aa)
Polysaccharide deacetylase n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8BAH4_RUBGE rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:CCF78724.1}; TaxID=1138313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
putative xylanase/chitin deacetylase rbh
SCNpilot_expt_1000_bf_scaffold_636_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11286..13415)
DNA (2130bp) protein (710aa)
Integrin alpha chain n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YU27_LYNSP
FG-GAP repeat-containing protein
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_636_11
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13479..14489)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036F15CB
glycosyltransferase family protein
Glycosyltransferase family protein {ECO:0000313|EMBL:BAL25880.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_1000_bf_scaffold_636_12
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14482..15276)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q439_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL25878.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_1000_bf_scaffold_636_13
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(15323..16456)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q641_9DELT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
SCNpilot_expt_1000_bf_scaffold_636_14
Cyanobium sp. PCC 7001, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16551..17858)
DNA (1308bp) protein (436aa)
Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMC4_9CHRO
Putative uncharacterized protein {ECO:0000313|EMBL:EDY38722.1}; TaxID=180281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. PCC 7001.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_636_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17855..19357)
DNA (1503bp) protein (501aa)
Polysaccharide biosynthesis protein n=1 Tax=Thauera sp. 27 RepID=N6XLL9_9RHOO rbh
polysaccharide biosynthesis protein
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_636_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19773..20741)
DNA (969bp) protein (323aa)
Glycosyl transferase family 2 id=1318107 bin=GWE1_T_denit_62_9 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
glycosyl transferase family protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_636_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20854..21183)
DNA (330bp) protein (110aa)
Putative Transcriptional Regulator, ArsR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGA2_THIDA
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Putative Transcriptional Regulator, ArsR family {ECO:0000313|EMBL:AAZ98348.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_636_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21345..22886
DNA (1542bp) protein (514aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
phosphoglyceromutase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DFE07
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_636_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22917..24170
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037617E1
M23 family peptidase
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_636_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24174..25589
DNA (1416bp) protein (472aa)
peptidase S41A, protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
peptidase S41 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BD57E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_636_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25659..26054
DNA (396bp) protein (132aa)
Putative uncharacterized protein id=1320206 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_636_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26065..26835
DNA (771bp) protein (257aa)
molybdopterin biosynthesis protein MoeB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FCE1C
adenylyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_636_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26823..27407)
DNA (585bp) protein (195aa)
Possible Transcriptional Regulator, TetR family id=1320208 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
slmA, ttk; nucleoid occlusion protein; K05501 TetR/AcrR family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_636_24
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27932..28267)
DNA (336bp) protein (112aa)
Putative plasmid stabilization system protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X7D0_VARPD
Plasmid stabilization system protein {ECO:0000313|EMBL:EXI78635.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
putative plasmid stabilization system protein
SCNpilot_expt_1000_bf_scaffold_636_25
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28278..28541)
DNA (264bp) protein (88aa)
Prevent host death protein, Phd antitoxin # A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGL1_9PROT
Prevent-host-death family protein {ECO:0000313|EMBL:EXI78636.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
prevent-host-death family protein
SCNpilot_expt_1000_bf_scaffold_636_26
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28590..29774)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTV1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KFB67357.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_636_27
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29771..33175)
DNA (3405bp) protein (1135aa)
Uncharacterized protein n=2 Tax=Acidithiobacillus caldus RepID=C6NTV0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AIA54054.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_636_28
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33168..33824)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZPA1_ACICS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEK56745.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
SCNpilot_expt_1000_bf_scaffold_636_29
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33855..35309)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=2 Tax=Acidithiobacillus caldus RepID=C6NTU7_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIA54051.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
SCNpilot_expt_1000_bf_scaffold_636_30
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35306..35674)
DNA (369bp) protein (123aa)
Type I restriction enzyme n=1 Tax=Clostridium sp. CAG:510 RepID=R6BWI1_9CLOT
Type I restriction-modification system specificity determinant {ECO:0000313|EMBL:CEG90071.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
restriction modification system DNA specificity domain-containing protein
Displaying items 1-30 of 34 in total

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