name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_667_1
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..2854)
|
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
rbh
DEAD/DEAH box helicase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A90D2
Type I site-specific deoxyribonuclease HsdR {ECO:0000313|EMBL:BAP87348.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_2 |
Not on your lists |
comp(2851..3126)
|
plasmid stabilization protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037FE6A4
Plasmid stabilization system protein {ECO:0000313|EMBL:EQD29275.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RelE/ParE family plasmid stabilization system protein
|
|
SCNpilot_expt_1000_bf_scaffold_667_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3205..3489)
|
Putative addiction module antidote protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E132_THIND
Transcriptional regulator {ECO:0000313|EMBL:KHS45047.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Putative addiction module antidote protein
|
|
SCNpilot_expt_1000_bf_scaffold_667_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3575..4609)
|
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
restriction endonuclease n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AE92A
rbh
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:AIO87234.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_5
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4980..6623)
|
DNA methyltransferase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A90D4
rbh
Type I restriction-modification (R-M) system HsdM {ECO:0000313|EMBL:BAP89073.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7553..8500)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHU2_THIDA
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ97791.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8521..8847)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHU2_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97791.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8849..11569)
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B274_9PROT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_9
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11950..13341)
|
multidrug transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F19BA
RND efflux system, outer membrane lipoprotein, NodT family
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:BAL23997.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13341..16487)
|
Hydrophobe/amphiphile efflux-1 HAE1 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ00_THIDA
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:AAZ97370.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hydrophobe/amphiphile efflux-1 HAE1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
|
|
SCNpilot_expt_1000_bf_scaffold_667_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16494..17690)
|
Secretion protein HlyD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIZ9_THIDA
secretion protein HlyD; K03585 membrane fusion protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17862..18485
|
Possible Transcriptional Regulator, TetR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIZ8_THIDA
rbh
TetR family transcriptional regulator
rbh
Possible Transcriptional Regulator, TetR family {ECO:0000313|EMBL:AAZ97372.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18489..19205)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003646E8D
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_14
unknown
|
Not on your lists |
comp(19274..19552)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_667_15
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19660..21723
|
Cytoplasmic molybdenum cofactor oxidoreductase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B464_9RHIZ
rbh
cytoplasmic molybdenum cofactor oxidoreductase
rbh
Cytoplasmic molybdenum cofactor oxidoreductase {ECO:0000313|EMBL:AGK56977.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21804..22988
|
MFS permease id=1361656 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
MFS permease
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22989..23237)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003763841
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23561..23953
|
Putative uncharacterized protein id=1332589 bin=GWE1_T_denit_62_9 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24443..24943
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIX3_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97402.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25166..25660
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003607CE5
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_21
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25794..27017
|
Extracellular ligand-binding receptor n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE97_9PROT
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:BAN34071.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
SCNpilot_expt_1000_bf_scaffold_667_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27014..30655
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003714FF6
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:AAZ97409.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
|
|
SCNpilot_expt_1000_bf_scaffold_667_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30738..31136
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378C89A
TraR/DksA family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31152..31457
|
30S ribosomal protein S30P / sigma 54 modulation protein id=12493136 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
30S ribosomal protein S30P / sigma 54 modulation protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31477..33006
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003675C93
hypothetical protein; K07028
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33003..34196
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIV4_THIDA
rbh
hypothetical protein
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34309..36681)
|
Uncharacterized protein id=1359356 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_28
R_NC10_66_22, NC10, Bacteria
|
Not on your lists |
comp(36919..37536)
|
Uncharacterized conserved protein UCP020606 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DK66_DESRL
hypothetical protein; K08984 putative membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37590..39065)
|
Ppx/GppA phosphatase (EC:3.6.1.11); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
exopolyphosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FA79B
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_667_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39062..40300)
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361BC2F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96998.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|