name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_903_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(182..988)
|
inositol monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=12497201 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1033..1779
|
RNA methyltransferase TrmH; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-]
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RNA methyltransferase TrmH, group 1 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJN8_THIDA
|
|
SCNpilot_expt_1000_bf_scaffold_903_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1832..2587
|
Serine O-acetyltransferase {ECO:0000313|EMBL:AAZ97115.1}; EC=2.3.1.30 {ECO:0000313|EMBL:AAZ97115.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Serine acetyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJN7_THIDA
|
|
SCNpilot_expt_1000_bf_scaffold_903_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2660..3121
|
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor id=12494500 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3147..4358
|
cysteine desulfurase IscS; K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
cysteine desulfurase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D0045
|
|
SCNpilot_expt_1000_bf_scaffold_903_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4470..4856
|
FeS cluster assembly scaffold IscU n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJN4_THIDA
scaffold protein; K04488 nitrogen fixation protein NifU and related proteins
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:AAZ97118.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_903_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4862..5185
|
heme biosynthesis protein HemY n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E7576
Iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein
Iron-sulphur cluster assembly protein IscA {ECO:0000313|EMBL:AAZ97119.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_903_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5318..5845
|
Co-chaperone protein HscB homolog id=1326616 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hscB; co-chaperone HscB; K04082 molecular chaperone HscB
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5847..7709
|
Chaperone protein HscA homolog id=1326615 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hscA; chaperone protein HscA; K04044 molecular chaperone HscA
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7732..8070
|
ferredoxin, 2Fe-2S type; K04755 ferredoxin, 2Fe-2S id=12495359 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ferredoxin, 2Fe-2S type; K04755 ferredoxin, 2Fe-2S
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8072..8266
|
hypothetical protein id=12497190 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8486..9688)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ08_THIDA
hypothetical protein; K07234 uncharacterized protein involved in response to NO
Uncharacterized protein {ECO:0000313|EMBL:AAZ97362.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_903_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9758..10762)
|
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE id=12495168 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_14
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10759..13281)
|
hydrogenase maturation protein HypF n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D68C2
hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF
Tax=RBG_16_Gamma2_64_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13274..14413)
|
hydrogenase assembly protein HupF n=1 Tax=Thiobacillus thioparus RepID=UPI0003674329
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:AAZ97337.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_903_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14410..15216)
|
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB id=12497097 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:AAZ97336.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_903_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15234..15602)
|
hydrogenase expression/formation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF id=12497096 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hydrogenase expression/formation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15595..15825)
|
hydrogenase assembly protein HypC n=1 Tax=Thiobacillus denitrificans RepID=UPI0003697EE7
hydrogenase expression/formation protein HupF/HypC; K04653 hydrogenase expression/formation protein HypC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15974..16447
|
peptidase M52, hydrogen uptake protein; K03605 hydrogenase 1 maturation protease [EC:3.4.24.-]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FF2DD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16437..16835
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003650BE4
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16882..17961
|
Ni/Fe hydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00035E548E
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17964..18623
|
Putative uncharacterized protein id=1337330 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18620..19882
|
heterodisulfide reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000363E139
heterodisulfide reductase
Heterodisulfide reductase {ECO:0000313|EMBL:AAZ97329.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_903_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19887..21677
|
hydrogenase 2 large subunit n=1 Tax=Thiobacillus thioparus RepID=UPI00035E3A52
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21710..22285
|
Membrane-bound hydrogenase component hupE id=1337334 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
[NiFe]-hydrogenase/urease accessory HupE/UreJ family protein; K03192 urease accessory protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22298..22615
|
H+-ATPase, subunit H id=1337335 bin=GWE1_T_denit_62_9 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
H+-ATPase subunit H
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22612..23652
|
H+transporting two-sector ATPase C (AC39) subunit; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360800B
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23654..25543
|
V-type ATPase 116 kDa subunit id=1337337 bin=GWE1_T_denit_62_9 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25756..26190
|
H+transporting two-sector ATPase C subunit; K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382EA3F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_903_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26190..26540
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003700448
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|