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SCNpilot_expt_1000_bf_scaffold_969

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_969_1
Acinetobacter brisouii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91..810)
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein n=1 Tax=Acinetobacter tandoii DSM 14970 = CIP 107469 RepID=R9AWV9_9GAMM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJV37646.1}; TaxID=396323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter brisouii.;"
ABC-type antimicrobial peptide transport system, ATPase component rbh
SCNpilot_expt_1000_bf_scaffold_969_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(964..2391)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
heavy metal sensor signal transduction histidine kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] rbh
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9
SCNpilot_expt_1000_bf_scaffold_969_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2369..3043)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F84F0
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
two component heavy metal response winged helix family transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR rbh
SCNpilot_expt_1000_bf_scaffold_969_4
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3399..4619
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VRM1_POLNA
major facilitator superfamily protein
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_expt_1000_bf_scaffold_969_5
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4931..5305)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6YI46_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO79704.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
SCNpilot_expt_1000_bf_scaffold_969_6
Thauera sp. B4, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5384..6052)
DNA (669bp) protein (223aa)
ExoD n=2 Tax=Thauera RepID=B4Y2X8_9RHOO rbh
Putative exopolysaccharide synthesis protein {ECO:0000313|EMBL:ACB13050.1}; TaxID=503999 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. B4.;"
exopolysaccharide synthesis ExoD rbh
SCNpilot_expt_1000_bf_scaffold_969_7
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6378..7466
DNA (1089bp) protein (363aa)
Predicted lipocalin-related protein and Bos/Can/Equ allergen family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ5_METPP rbh
lipocalin-like protein rbh
Predicted lipocalin-related protein and Bos/Can/Equ allergen family {ECO:0000313|EMBL:ABM94684.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_expt_1000_bf_scaffold_969_8
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7516..8499
DNA (984bp) protein (328aa)
Diacylglycerol kinase catalytic region n=2 Tax=Thauera RepID=C4KAP0_THASP rbh
diacylglycerol kinase; K07029 rbh
Diacylglycerol kinase {ECO:0000313|EMBL:ENO85783.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
SCNpilot_expt_1000_bf_scaffold_969_9
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8496..9329
DNA (834bp) protein (278aa)
Metallophosphoesterase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KAP1_THASP rbh
DNA repair exonuclease {ECO:0000313|EMBL:EXU78494.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
metallophosphoesterase rbh
SCNpilot_expt_1000_bf_scaffold_969_10
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9278..10204)
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGI9_METPP rbh
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM94678.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_expt_1000_bf_scaffold_969_11
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10314..10733
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKH9_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36899.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_969_12
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10855..11943
DNA (1089bp) protein (363aa)
Na+/Ca+ antiporter, CaCA family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKI0_ACCPU rbh
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein rbh
Na+/Ca+ antiporter, CaCA family {ECO:0000313|EMBL:ACV36900.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_969_13
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12083..12550
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKI1_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36901.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_969_14
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12626..13108)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKI2_ACCPU
hypothetical protein; K09793 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36902.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_969_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13595..14767)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=I6RM05_PSEAI rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
SCNpilot_expt_1000_bf_scaffold_969_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14775..18221)
DNA (3447bp) protein (1149aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWA8_PSEUU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
SCNpilot_expt_1000_bf_scaffold_969_17
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18218..18898)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW9_9GAMM
hypothetical protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
SCNpilot_expt_1000_bf_scaffold_969_18
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18895..20370)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein (Fragment) id=1361660 bin=GWE1_T_denit_62_9 species=Ricinus communis genus=Ricinus taxon_order=Malpighiales taxon_class=unknown phylum=Streptophyta tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
SCNpilot_expt_1000_bf_scaffold_969_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20352..21212)
DNA (861bp) protein (287aa)
Putative uncharacterized protein id=1361659 bin=GWE1_T_denit_62_9 species=Xanthomonas fuscans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_969_20
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21585..22985)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003726F67 rbh
Cell division protein Fic {ECO:0000313|EMBL:KHD32226.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_969_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23374..23580)
DNA (207bp) protein (69aa)
DNA-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D946B
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 21 items

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