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SCNpilot_expt_1000_bf_scaffold_2681

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2681_1
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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20..808
DNA (789bp) protein (263aa)
Molybdenum transport protein ModE n=3 Tax=Azotobacter vinelandii RepID=MODE_AZOVI
modE; Mo regulation, Mo processing homeostasis
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_expt_1000_bf_scaffold_2681_2
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1116..1553
DNA (438bp) protein (146aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPX1_SIDLE
molybdenum ABC transporter, periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein
Tax=GWA2_Gallionellales_60_142_curated
SCNpilot_expt_1000_bf_scaffold_2681_3
unknown

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1568..1711
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2681_4
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1708..2232
DNA (525bp) protein (175aa)
Molybdate ABC transporter, inner membrane subunit n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPX2_SIDLE
molybdate ABC transporter permease; K02018 molybdate transport system permease protein
Tax=GWF2_Sideroxydans_59_14_curated
SCNpilot_expt_1000_bf_scaffold_2681_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2229..3302
DNA (1074bp) protein (358aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
molybdate ABC transporter ATPase; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Molybdate ABC transporter, ATPase subunit n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNX2_POLNA
SCNpilot_expt_1000_bf_scaffold_2681_6
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3602..4942)
DNA (1341bp) protein (447aa)
Uncharacterized protein {ECO:0000313|EMBL:KDB51602.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
AAA-4 family protein id=4300347 bin=GWC2_Geobacteraceae_55_20 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2681_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5116..7797)
DNA (2682bp) protein (894aa)
DEAD-like helicase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5L4_9BURK rbh
type III restriction protein res subunit rbh
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
SCNpilot_expt_1000_bf_scaffold_2681_8
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7794..9641)
DNA (1848bp) protein (616aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7A7_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBA26901.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
DNA methylase N-4/N-6 domain protein rbh
SCNpilot_expt_1000_bf_scaffold_2681_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9651..10892)
DNA (1242bp) protein (414aa)
glycolate oxidase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CD2D1
glcF; glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2681_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10894..12069)
DNA (1176bp) protein (392aa)
glcE; glycolate oxidase FAD binding subunit; K11472 glycolate oxidase FAD binding subunit id=12495225 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glcE; glycolate oxidase FAD binding subunit; K11472 glycolate oxidase FAD binding subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2681_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12069..13520)
DNA (1452bp) protein (484aa)
glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15]
Glycolate oxidase, subunit GlcD id=1333106 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2681_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13540..14697)
DNA (1158bp) protein (386aa)
Hrp-dependent type III effector protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363DC8C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2681_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14981..16375)
DNA (1395bp) protein (465aa)
transketolase n=1 Tax=Thiobacillus denitrificans RepID=UPI000378EAFC
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 13 items

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