name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1118_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..359)
|
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] id=12495840 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(463..2694)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363D54F
type IV pilus assembly protein PilQ; K02666 type IV pilus assembly protein PilQ
Type IV pilus assembly protein PilQ {ECO:0000313|EMBL:AAZ96159.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1118_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2730..3227)
|
Type IV pilus assembly protein PilP id=1302819 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
type IV pilus assembly protein PilP; K02665 type IV pilus assembly protein PilP
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3224..3877)
|
Type IV pilus assembly membrane transmembrane protein id=1302820 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
type IV pilus assembly membrane transmembrane protein; K02664 type IV pilus assembly protein PilO
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3874..4479)
|
Type IV pilus assembly protein PilN n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SM93_THIDA
type IV pilus assembly protein PilN; K02663 type IV pilus assembly protein PilN
Type IV pilus assembly protein PilN {ECO:0000313|EMBL:AAZ96156.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1118_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4476..5564)
|
Type IV pilus assembly protein PilM id=1302822 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5753..8119
|
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
penicillin-binding protein 1A n=1 Tax=Thiobacillus denitrificans RepID=UPI0003772513
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8116..8691
|
Putative uncharacterized protein id=1302824 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8762..10156
|
putative glycosyltransferase id=12493051 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative glycosyltransferase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10170..12251
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E4E22
periplasmic sensor signal transduction histidine kinase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12248..13600
|
Fis family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00035E4150
two component Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13652..16429
|
Putative uncharacterized protein id=1302828 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16493..19270
|
TPR repeat id=1302829 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_14
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19478..20773
|
hypothetical protein; K02004 putative ABC transport system permease protein id=12493703 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
rbh
Lipoprotein-releasing system transmembrane protein LolE {ECO:0000313|EMBL:KFB71294.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein; K02004 putative ABC transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1118_15
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20785..21996
|
hypothetical protein; K02004 putative ABC transport system permease protein id=12493704 bin=THIO_HI species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K02004 putative ABC transport system permease protein
DUF214 {ECO:0000313|EMBL:CAD86154.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1118_16
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22007..23569)
|
hypothetical protein id=12493720 bin=THIO_HI species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EXI90778.1}; Flags: Precursor;; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1118_17
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23571..24317)
|
ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] id=12493721 bin=THIO_HI species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter ATP-binding protein YtrE {ECO:0000313|EMBL:EXI76076.1}; Flags: Precursor;; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1118_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24362..25138
|
hypothetical protein id=12493722 bin=THIO_HI species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCU62763.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1118_19
uncultured bacterium CSLC3, Bacteria
|
Not on your lists |
25175..26011
|
Putative membrane protein n=1 Tax=uncultured bacterium CSLC3 RepID=G4WVU1_9BACT
rbh
Putative membrane protein {ECO:0000313|EMBL:AEQ20543.1}; TaxID=1091572 species="Bacteria; environmental samples.;" source="uncultured bacterium CSLC3.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1118_20
uncultured bacterium CSLC3, Bacteria
|
Not on your lists |
comp(26148..27131)
|
PEP-CTERM motif protein n=1 Tax=uncultured bacterium CSLC3 RepID=G4WVU3_9BACT
PEP-CTERM motif protein {ECO:0000313|EMBL:AEQ20545.1}; TaxID=1091572 species="Bacteria; environmental samples.;" source="uncultured bacterium CSLC3.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1118_21
unknown
|
Not on your lists |
comp(27314..28267)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1118_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28264..29382)
|
Putative Phosphatidylinositol alpha-mannosyltransferase n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8BAP3_RUBGE
rbh
Putative Phosphatidylinositol alpha-mannosyltransferase {ECO:0000313|EMBL:CCF78681.1}; TaxID=1138313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
glycosyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1118_23
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29443..30528)
|
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000346ADC3
rbh
Molybdopterin biosynthesis protein MoeY {ECO:0000313|EMBL:KHA80011.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1118_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30530..31387)
|
NAD/FAD-binding protein n=1 Tax=uncultured bacterium RepID=B2M0U8_9BACT
UBA/THIF-type NAD/FAD binding protein
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_25
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31403..32188)
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABJ4_9PROT
Long-chain N-acyl amino acid synthase {ECO:0000313|EMBL:GAO34910.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1118_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32299..33303)
|
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24]
rbh
delta-aminolevulinic acid dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DC86
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33465..34094)
|
Probable GTP-binding protein EngB n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=ENGB_THIDA
cell division checkpoint GTPase YihA; K03978 GTP-binding protein
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1118_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34167..34781
|
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE16C
cytochrome c oxidase
Cytochrome c oxidase {ECO:0000313|EMBL:AAZ96140.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1118_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35175..35888
|
hypothetical protein id=12495861 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1118_30
Caenorhabditis brenneri, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa
|
Not on your lists |
35960..36694
|
Uncharacterized protein id=12495862 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
CBN-RGR-1 protein {ECO:0000313|EMBL:EGT33749.1}; TaxID=135651 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis brenneri (Nematode worm).;"
hypothetical protein; K11095 U1 small nuclear ribonucleoprotein C
|