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SCNpilot_expt_1000_bf_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 296 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_415_1
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..700
DNA (699bp) protein (233aa)
UPI0003C7E89F related cluster n=1 Tax=unknown RepID=UPI0003C7E89F
Leucobacter komagatae strain VKM ST2845 L_komagatae_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51627.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_415_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(787..1587)
DNA (801bp) protein (267aa)
Linocin-M18 {ECO:0000313|EMBL:KJL24598.1}; EC=3.4.-.- {ECO:0000313|EMBL:KJL24598.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
bacteriocin n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6F92E rbh
bacteriocin rbh
SCNpilot_expt_1000_bf_scaffold_415_3
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1618..1857)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XLN0_MICPN
hypothetical protein; K07223 putative iron-dependent peroxidase
Uncharacterized protein {ECO:0000313|EMBL:BAK36296.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_expt_1000_bf_scaffold_415_4
unknown

Not on your lists

1952..2137
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_415_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2739..3227
DNA (489bp) protein (163aa)
hypothetical protein n=2 Tax=Microbacterium sp. B19 RepID=UPI00034A2AA6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73950.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_415_6
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3237..4337)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBE6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EDN80520.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_415_7
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4450..5352
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Kocuria atrinae RepID=UPI00037C9706 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHE74182.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
putative LysR-family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_415_8
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5378..6298)
DNA (921bp) protein (307aa)
RNA polymerase sigma24 factor n=1 Tax=Brevibacterium linens RepID=UPI0001BC2BC7 rbh
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KHL12138.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
sig57; putative sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_expt_1000_bf_scaffold_415_9
Xenorhabdus szentirmaii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6470..6799
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Actinomyces massiliensis RepID=UPI0002D9F6E6
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:CDL81594.1}; TaxID=1427518 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus szentirmaii DSM 16338.;"
antibiotic biosynthesis monooxygenase
SCNpilot_expt_1000_bf_scaffold_415_10
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6796..7500
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031E235A
Uncharacterized protein {ECO:0000313|EMBL:KDA05391.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_415_11
unknown

Not on your lists

comp(7507..8040)
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_415_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8410..10143
DNA (1734bp) protein (578aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1] rbh
Thiamine pyrophosphate enzyme, TPP binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUB3_LEIAQ rbh
Thiamine pyrophosphate enzyme, TPP binding domain protein {ECO:0000313|EMBL:ERK72139.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_expt_1000_bf_scaffold_415_13
Corynebacterium glyciniphilum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10156..10878
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Nocardiopsis prasina RepID=UPI0003457CB7 rbh
Putative membrane protein {ECO:0000313|EMBL:AHW62827.1}; TaxID=1404245 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glyciniphilum AJ 3170.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_415_14
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10988..11842
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI0003675BCC rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EYT53052.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_415_15
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11888..12541
DNA (654bp) protein (218aa)
Methyltransferase family protein n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J5EQM6_9MYCO
Methyltransferase family protein {ECO:0000313|EMBL:EJO90644.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium colombiense CECT 3035.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_415_16
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12612..12983)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Serinicoccus marinus RepID=UPI0003B4F1D5
Uncharacterized protein {ECO:0000313|EMBL:KGN36826.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
SCNpilot_expt_1000_bf_scaffold_415_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13041..14537)
DNA (1497bp) protein (499aa)
Lysophospholipase {ECO:0000313|EMBL:AJR17985.1}; EC=3.1.1.5 {ECO:0000313|EMBL:AJR17985.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Secretory lipase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4G4_CELFA rbh
secretory lipase rbh
SCNpilot_expt_1000_bf_scaffold_415_18
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15483..15716)
DNA (234bp) protein (78aa)
transposase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6DD16
Transposase family protein {ECO:0000313|EMBL:EFV91344.1}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
transposase IS204/IS1001/IS1096/IS1165 family protein
SCNpilot_expt_1000_bf_scaffold_415_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15668..16186)
DNA (519bp) protein (173aa)
transposase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6DD16
Transposase {ECO:0000313|EMBL:EXJ51463.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transposase IS204/IS1001/IS1096/IS1165 family protein
SCNpilot_expt_1000_bf_scaffold_415_20
Dermabacter sp. HFH0086, Dermabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17071..17211
DNA (141bp) protein (47aa)
HsdR family type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Dermabacter sp. HFH0086 RepID=S3Z310_9MICO
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EPH15125.1}; TaxID=1203568 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Dermabacter.;" source="Dermabacter sp. HFH0086.;"
SCNpilot_expt_1000_bf_scaffold_415_21
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17563..17886
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN33607.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
SCNpilot_expt_1000_bf_scaffold_415_22
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17879..20749
DNA (2871bp) protein (957aa)
Uncharacterized protein n=1 Tax=Rhodococcus erythropolis DN1 RepID=T5I377_RHOER rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN33608.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
SCNpilot_expt_1000_bf_scaffold_415_23
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21125..22276)
DNA (1152bp) protein (384aa)
Abortive infection protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4U1_BEUC1
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ACQ80069.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_415_24
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22273..22641)
DNA (369bp) protein (123aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4U0_BEUC1
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACQ80068.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_415_25
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22767..23315)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4T9_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80067.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_415_26
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23462..26212
DNA (2751bp) protein (917aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
aceE; pyruvate dehydrogenase subunit E1 (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] rbh
Pyruvate dehydrogenase E1 component n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4T8_BEUC1 rbh
SCNpilot_expt_1000_bf_scaffold_415_27
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26331..27509
DNA (1179bp) protein (393aa)
Putative transcriptional regulator, PucR family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4T6_BEUC1 rbh
PucR family transcriptional regulator rbh
Putative transcriptional regulator, PucR family {ECO:0000313|EMBL:ACQ80064.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_415_28
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27559..28506
DNA (948bp) protein (316aa)
ACP S-malonyltransferase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] rbh
(Acyl-carrier-protein) S-malonyltransferase n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BF53_SANKS rbh
(Acyl-carrier-protein) S-malonyltransferase {ECO:0000313|EMBL:ACZ21349.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_expt_1000_bf_scaffold_415_29
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28577..29605
DNA (1029bp) protein (343aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
Beta-ketoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|SAAS:SAAS00048621}; EC=2.3.1.180 {ECO:0000256|SAAS:SAAS00048621};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4T4_BEUC1 rbh
SCNpilot_expt_1000_bf_scaffold_415_30
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29693..29941
DNA (249bp) protein (83aa)
Acyl carrier protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=ACP_BEUC1
acpP; acyl carrier protein; K02078 acyl carrier protein
Acyl carrier protein {ECO:0000255|HAMAP-Rule:MF_01217}; Short=ACP {ECO:0000255|HAMAP-Rule:MF_01217};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying items 1-30 of 296 in total

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