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SCNpilot_expt_1000_bf_scaffold_539

Search features with annotation key words

Displaying items 1-30 of 386 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_539_1
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..710
DNA (708bp) protein (236aa)
Uncharacterized protein (Fragment) n=1 Tax=Brevibacterium casei S18 RepID=K9AF27_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EKU45889.1}; Flags: Fragment;; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_539_2
Streptomyces sp. SPB74, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

854..1723
DNA (870bp) protein (290aa)
Beta-lactamase inhibitory protein II n=1 Tax=Streptomyces sp. SPB74 RepID=B5GCK1_9ACTO rbh
Beta-lactamase inhibitory protein II {ECO:0000313|EMBL:EDY44047.2}; TaxID=465543 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB74).;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_539_3
unknown

Not on your lists

1795..2268
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2275..3744)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XI03_MICPN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAK35672.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_expt_1000_bf_scaffold_539_5
unknown

Not on your lists

3871..4053
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_6
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4100..4846)
DNA (747bp) protein (249aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI000379BCEA
NUDIX hydrolase {ECO:0000313|EMBL:KGM00441.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
SCNpilot_expt_1000_bf_scaffold_539_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4937..5911
DNA (975bp) protein (325aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3C1_CELFA rbh
ADP-ribosylation/Crystallin J1 rbh
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:AEE45342.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_expt_1000_bf_scaffold_539_8
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5874..7391)
DNA (1518bp) protein (506aa)
membrane protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629F98 rbh
Putative niacin/nicotinamide transporter NaiP {ECO:0000313|EMBL:KJL27950.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease of the major facilitator superfamily; K08369 MFS transporter, putative metabolite:H+ symporter
SCNpilot_expt_1000_bf_scaffold_539_9
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8098..9570)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A13E6
Uncharacterized protein {ECO:0000313|EMBL:AHH17666.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
CRISPR-associated protein Cas1
SCNpilot_expt_1000_bf_scaffold_539_10
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9907..12657)
DNA (2751bp) protein (917aa)
COG0553: Superfamily II DNA/RNA helicases, SNF2 family n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MDQ9_9NOCA rbh
COG0553: Superfamily II DNA/RNA helicases, SNF2 family {ECO:0000313|EMBL:CCW13722.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
ATP-dependent helicase rbh
SCNpilot_expt_1000_bf_scaffold_539_11
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12847..13851)
DNA (1005bp) protein (335aa)
Esterase/lipase-like protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RDZ3_9BIFI rbh
Esterase/lipase-like protein {ECO:0000313|EMBL:KJY65117.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
esterase/lipase-like protein rbh
SCNpilot_expt_1000_bf_scaffold_539_12
unknown

Not on your lists

comp(13963..15510)
DNA (1548bp) protein (516aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_13
unknown

Not on your lists

comp(15488..16546)
DNA (1059bp) protein (353aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_14
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16666..18597)
DNA (1932bp) protein (644aa)
ATP/GTP binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RB75_9ACTO rbh
ATP-binding protein {ECO:0000313|EMBL:KGM10951.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
AAA ATPase; K09384 hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_539_15
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18792..19421)
DNA (630bp) protein (210aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D2G5_9ACTO rbh
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:EFC82877.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_539_16
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19536..20294)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036F2317
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_expt_1000_bf_scaffold_539_17

Not on your lists

comp(20482..20847)
DNA (366bp) protein (122aa)
mRNA interferase MazF2 n=1 Tax=Glaciibacter superstes RepID=UPI0003B768B0
PemK-like protein {ECO:0000313|EMBL:EQD43786.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Conserved protein of unknown function, possible toxin MazF6
SCNpilot_expt_1000_bf_scaffold_539_18
unknown

Not on your lists

comp(20841..21107)
DNA (267bp) protein (89aa)
transcriptional regulator, CopG family
SCNpilot_expt_1000_bf_scaffold_539_19
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21397..22383
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVF3_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80540.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_20
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22462..24075
DNA (1614bp) protein (538aa)
DNA-repair protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVF2_BEUC1 rbh
DNA-repair protein; K14161 protein ImuB rbh
DNA-repair protein {ECO:0000313|EMBL:ACQ80539.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_21
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24075..27803
DNA (3729bp) protein (1243aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] rbh
Error-prone DNA polymerase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVF1_BEUC1 rbh
SCNpilot_expt_1000_bf_scaffold_539_22
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27852..29153)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVF0_BEUC1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACQ80537.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_23
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29298..30281)
DNA (984bp) protein (328aa)
Aminoglycoside phosphotransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVE9_BEUC1
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACQ80536.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_24
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30288..30806)
DNA (519bp) protein (173aa)
tRNA/rRNA methyltransferase SpoU; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVE6_BEUC1
SCNpilot_expt_1000_bf_scaffold_539_25
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30858..32045)
DNA (1188bp) protein (396aa)
ATPase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVE5_BEUC1
ATPase
ATPase {ECO:0000313|EMBL:ACQ80532.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_26
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32092..32790)
DNA (699bp) protein (233aa)
Predicted membrane protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BK42_SANKS
Vitamin K epoxide reductase {ECO:0000313|EMBL:KGM09692.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_539_27
unknown

Not on your lists

32929..33078
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_28
unknown

Not on your lists

33194..33502
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_29
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33627..34130)
DNA (504bp) protein (168aa)
HNH endonuclease n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZZ1_CELFA
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AEE44913.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_expt_1000_bf_scaffold_539_30
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34165..35388)
DNA (1224bp) protein (408aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] rbh
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
RNA-splicing ligase RtcB n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF45_CELFN rbh
Displaying items 1-30 of 386 in total

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