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SCNpilot_expt_1000_bf_scaffold_670

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_670_1
unknown

Not on your lists

comp(1..477)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_670_2
Jonesia denitrificans, Jonesia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

573..965
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) RepID=C7R1I6_JONDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV09821.1}; TaxID=471856 species="Bacteria; Actinobacteria; Micrococcales; Jonesiaceae; Jonesia.;" source="Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134); (Listeria denitrificans).;"
SCNpilot_expt_1000_bf_scaffold_670_3
unknown

Not on your lists

1112..1438
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_670_4
unknown

Not on your lists

1438..1551
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_670_5
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2023..2316
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BXW8_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ31759.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_expt_1000_bf_scaffold_670_6
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2553..3500)
DNA (948bp) protein (316aa)
UspA domain protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZH3_BEUC1 rbh
UspA domain-containing protein rbh
UspA domain protein {ECO:0000313|EMBL:ACQ79145.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_7
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3744..4535)
DNA (792bp) protein (264aa)
NLP/P60 protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZH2_BEUC1
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACQ79144.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_8
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4958..5644)
DNA (687bp) protein (229aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZH1_BEUC1 rbh
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator rbh
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ACQ79143.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_9
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5745..6917
DNA (1173bp) protein (391aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
Phosphoserine aminotransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZG9_BEUC1 rbh
SCNpilot_expt_1000_bf_scaffold_670_10
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7196..8503)
DNA (1308bp) protein (436aa)
Major facilitator superfamily MFS_1 n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZG4_BEUC1 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACQ79136.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8500..8934)
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZG3_BEUC1
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACQ79135.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_12
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9094..9933)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZD8_BEUC1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACQ79110.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_13
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9933..10316)
DNA (384bp) protein (128aa)
Cold-shock DNA-binding domain protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZD7_BEUC1
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACQ79109.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_14
unknown

Not on your lists

comp(10812..11063)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_670_15
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11437..12369
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZD6_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ79108.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_16
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12451..14148
DNA (1698bp) protein (566aa)
type III restriction protein res subunit; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12] rbh
Type III restriction protein res subunit n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZD5_BEUC1 rbh
Helicase {ECO:0000313|EMBL:KEP22870.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
SCNpilot_expt_1000_bf_scaffold_670_17
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14227..16302
DNA (2076bp) protein (692aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZD2_BEUC1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACQ79104.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_18
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16392..17159
DNA (768bp) protein (256aa)
Phage shock protein A, PspA n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZD1_BEUC1 rbh
phage shock protein PspA; K03969 phage shock protein A rbh
Phage shock protein A, PspA {ECO:0000313|EMBL:ACQ79103.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_19
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17426..17992
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZD0_BEUC1 rbh
hypothetical protein; K06860 uncharacterized protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACQ79102.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_20
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18638..19378
DNA (741bp) protein (247aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC9_BEUC1 rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACQ79101.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_21
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19375..20958
DNA (1584bp) protein (528aa)
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Histidine kinase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC8_BEUC1 rbh
SCNpilot_expt_1000_bf_scaffold_670_22
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21081..22160
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC7_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ79099.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_23
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22218..22511
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC6_BEUC1
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_24
unknown

Not on your lists

comp(22886..23224)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_670_25
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23490..24785
DNA (1296bp) protein (432aa)
glycosyl hydrolase family protein; K01193 beta-fructofuranosidase [EC:3.2.1.26]
Glycosyl hydrolase family 32 domain protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C559_STRBB
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:ACQ79087.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_670_26
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24782..25375
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7L5J5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC56214.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
NUDIX hydrolase
SCNpilot_expt_1000_bf_scaffold_670_27
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25387..26304
DNA (918bp) protein (306aa)
Uncharacterized conserved protein n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5C900_MICLC
Uncharacterized protein {ECO:0000313|EMBL:EZP56179.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_670_28
unknown

Not on your lists

26393..27055
DNA (663bp) protein (221aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_670_29
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27052..27633
DNA (582bp) protein (194aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BF36_SANKS
RNA polymerase sigma factor SigL {ECO:0000313|EMBL:KJQ52972.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_670_30
unknown

Not on your lists

comp(27730..28209)
DNA (480bp) protein (160aa)

This feature has no annotations

Displaying items 1-30 of 80 in total

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