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SCNpilot_expt_1000_bf_scaffold_305

Search features with annotation key words

Displaying items 1-30 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_305_1
unknown

Not on your lists

2..82
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_305_2
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131..463
DNA (333bp) protein (111aa)
Cell division protein FtsB n=1 Tax=Herbaspirillum sp. CF444 RepID=J2UC62_9BURK
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
Septum formation initiator; K05589 cell division protein FtsB
SCNpilot_expt_1000_bf_scaffold_305_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(472..1149)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DC4747
Putative periplasmic protein {ECO:0000313|EMBL:CDM23613.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_305_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1288..2211)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000314CB1D
nahR1; putative LysR-type transcriptional regulator NahR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_1000_bf_scaffold_305_5
Gluconacetobacter sp. SXCC-1, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2325..3161
DNA (837bp) protein (279aa)
taurine dioxygenase (EC:1.14.11.17)
Alpha-ketoglutarate-dependent 2-4-dichlorophenoxyacetate dioxygenase n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S9Q0_9PROT
Alpha-ketoglutarate-dependent 2-4-dichlorophenoxyacetate dioxygenase {ECO:0000313|EMBL:EGG76529.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
SCNpilot_expt_1000_bf_scaffold_305_6
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3176..4147
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA23_ALIDK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP86007.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_305_7
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4169..5095)
DNA (927bp) protein (309aa)
33 kDa chaperonin n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F5X6_9BURK rbh
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
hslO; 33 kDa chaperonin; K04083 molecular chaperone Hsp33 rbh
SCNpilot_expt_1000_bf_scaffold_305_8
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5341..7584)
DNA (2244bp) protein (748aa)
Putative AMP-binding protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QRU1_BORBO
AMP-binding protein
AMP-binding enzyme {ECO:0000313|EMBL:KCV59819.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
SCNpilot_expt_1000_bf_scaffold_305_9
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7772..8704
DNA (933bp) protein (311aa)
alpha/beta hydrolase n=1 Tax=Janthinobacterium lividum RepID=UPI000289966F
Alpha/beta hydrolase {ECO:0000313|EMBL:EZP40133.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hydrolase
SCNpilot_expt_1000_bf_scaffold_305_10
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8689..9531
DNA (843bp) protein (281aa)
phosphoesterase n=1 Tax=Herbaspirillum lusitanum RepID=UPI00037A22E3 rbh
Putative metal-dependent phosphoesterase, PHP family {ECO:0000313|EMBL:EJL82316.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
phosphoesterase PHP, N-terminal; K07053 rbh
SCNpilot_expt_1000_bf_scaffold_305_11
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9537..10100
DNA (564bp) protein (188aa)
Transcription elongation factor GreB n=1 Tax=Achromobacter piechaudii HLE RepID=J4YM41_9BURK rbh
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
Transcription elongation factor GreB rbh
SCNpilot_expt_1000_bf_scaffold_305_12
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10109..12367)
DNA (2259bp) protein (753aa)
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC:3.1.7.2); K00951 GTP pyrophosphokinase [EC:2.7.6.5] rbh
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L065_BORA1 rbh
RelA/SpoT family protein {ECO:0000313|EMBL:KCB40630.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
SCNpilot_expt_1000_bf_scaffold_305_13
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12461..12664)
DNA (204bp) protein (68aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hol
DNA-directed RNA polymerase subunit omega n=11 Tax=Bordetella RepID=RPOZ_BORA1
rpoZ; DNA-directed RNA polymerase subunit omega
SCNpilot_expt_1000_bf_scaffold_305_14
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12700..13341)
DNA (642bp) protein (214aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
Guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T752_ALCXX
SCNpilot_expt_1000_bf_scaffold_305_15
unknown

Not on your lists

comp(13368..13475)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_305_16
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13498..14190)
DNA (693bp) protein (231aa)
Toluene tolerance, Ttg2 family protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4J7T0_9BURK
Toluene tolerance protein Ttg2D {ECO:0000313|EMBL:KCB45735.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
toluene tolerance, Ttg2 family protein; K07323 putative toluene tolerance protein
SCNpilot_expt_1000_bf_scaffold_305_17
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14367..16223
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036CCD24 rbh
Peptidase {ECO:0000313|EMBL:KJK25782.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_305_18
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16228..16869)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5R0Q5_9PSED
DsbA-like protein {ECO:0000313|EMBL:EFF73595.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
thioredoxin domain-containing protein, DsbA family; K07396 putative protein-disulfide isomerase
SCNpilot_expt_1000_bf_scaffold_305_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16978..17940
DNA (963bp) protein (321aa)
Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=I4K1Q9_PSEFL rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EIK58649.1}; TaxID=1038923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens Q8r1-96.;"
SCNpilot_expt_1000_bf_scaffold_305_20
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17931..19313)
DNA (1383bp) protein (461aa)
Nucleotide sugar dehydrogenase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIC1_9BURK
UDP-glucose 6-dehydrogenase
Tax=CG_Beta_01
SCNpilot_expt_1000_bf_scaffold_305_21
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19388..20458)
DNA (1071bp) protein (357aa)
ABC transporter ATP-binding protein (EC:3.6.3.-); K07114 uncharacterized protein rbh
ABC transporter ATP-binding protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R0N7_RALPI rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGW93952.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_expt_1000_bf_scaffold_305_22
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20698..21711
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036B60A8 rbh
trypsin-like serine protease; exported protein rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_1000_bf_scaffold_305_23
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21732..22748
DNA (1017bp) protein (339aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase AAA n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QSQ6_RALPI rbh
ATPase AAA {ECO:0000313|EMBL:AGW93954.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_expt_1000_bf_scaffold_305_24
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22723..23718
DNA (996bp) protein (332aa)
ATPase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003654391 rbh
hypothetical protein rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_1000_bf_scaffold_305_25
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23735..24787
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037D9A2D rbh
von Willebrand factor A {ECO:0000313|EMBL:AGW93956.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein; K07114 uncharacterized protein rbh
SCNpilot_expt_1000_bf_scaffold_305_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24869..25789
DNA (921bp) protein (307aa)
Polyphosphate kinase 2, PA0141 family n=1 Tax=Variovorax sp. CF313 RepID=J3CF28_9BURK
Polyphosphate kinase 2, PA0141 family {ECO:0000313|EMBL:EJL70379.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_305_27
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25856..26179
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D8A3_COMTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY32922.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
SCNpilot_expt_1000_bf_scaffold_305_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26204..27166)
DNA (963bp) protein (321aa)
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9H6_ALIDK
LysR family transcriptional regulator
Regulatory protein LysR {ECO:0000313|EMBL:ADV01171.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_305_29
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27208..28158
DNA (951bp) protein (317aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
dihydrodipicolinate synthetase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395912B
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ABM31984.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_expt_1000_bf_scaffold_305_30
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28198..29163
DNA (966bp) protein (322aa)
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSV7_POLNA
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM38735.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Displaying items 1-30 of 218 in total

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