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SCNpilot_expt_1000_bf_scaffold_527

Search features with annotation key words

Displaying items 1-30 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_527_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..209
DNA (207bp) protein (69aa)
P-type conjugative transfer protein TrbG n=5 Tax=Proteobacteria RepID=C1MFC4_9ENTR
P-type conjugative transfer protein TrbG
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KIL05448.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCNpilot_expt_1000_bf_scaffold_527_2
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212..1486
DNA (1275bp) protein (425aa)
Conjugation TrbI family protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WX59_PSEDE rbh
Conjugative transfer protein TrbI {ECO:0000313|EMBL:BAP44846.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
conjugation TrbI family protein rbh
SCNpilot_expt_1000_bf_scaffold_527_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1483..1701
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LFE8_BURGS
Conjugal transfer protein {ECO:0000313|EMBL:AIJ47725.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_527_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1710..2447)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVH0_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU46903.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_527_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2684..5017
DNA (2334bp) protein (778aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U8EGD7_PSEAI rbh
ATP-dependent endonuclease rbh
ATP-dependent endonuclease {ECO:0000313|EMBL:AFU46904.1}; Uncharacterized protein {ECO:0000313|EMBL:BAJ72267.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_527_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5014..6891
DNA (1878bp) protein (626aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
hypothetical protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U8EFA0_PSEAI rbh
SCNpilot_expt_1000_bf_scaffold_527_7
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7007..7252
DNA (246bp) protein (82aa)
Type IV secretory pathway, VirB10 component n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C7K2_9XANT
Type IV secretory pathway, VirB10 component {ECO:0000313|EMBL:EGD18497.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
trbI; TrbI-like protein; K03195 type IV secretion system protein VirB10
SCNpilot_expt_1000_bf_scaffold_527_8
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7844..8092
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI000348AD5A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT40170.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria MEX-5.;"
SCNpilot_expt_1000_bf_scaffold_527_9
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8512..9756
DNA (1245bp) protein (415aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
carboxylate-amine ligase; K06048 carboxylate-amine ligase [EC:6.3.-.-] rbh
Carboxylate-amine ligase BAV0234 n=1 Tax=Bordetella avium (strain 197N) RepID=CAAL_BORA1 rbh
SCNpilot_expt_1000_bf_scaffold_527_10
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9848..11227
DNA (1380bp) protein (460aa)
MmgE/PrpD family protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SWT6_ALCXX rbh
MmgE/PrpD family protein {ECO:0000313|EMBL:EGP47273.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
MmgE/PrpD family protein rbh
SCNpilot_expt_1000_bf_scaffold_527_11
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11252..11974)
DNA (723bp) protein (241aa)
IclR family transcriptional regulator n=1 Tax=Achromobacter piechaudii HLE RepID=J4YTU7_9BURK rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KGD86812.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
IclR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_527_12
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12096..13532
DNA (1437bp) protein (479aa)
FAD linked oxidase domain-containing protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SWT8_ALCXX rbh
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:EGP47275.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
putative FAD-binding oxidase rbh
SCNpilot_expt_1000_bf_scaffold_527_13
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13548..14912
DNA (1365bp) protein (455aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
purB; adenylosuccinate lyase PurB (EC:4.3.2.2) rbh
Adenylosuccinate lyase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XIR2_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_527_14
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14972..15973
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SWU0_ALCXX rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP47277.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
putative Bug-like extra-cytoplasmic solute receptor, TTT family rbh
SCNpilot_expt_1000_bf_scaffold_527_15
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15999..16862
DNA (864bp) protein (288aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
3-mercaptopyruvate sulfurtransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS36_ACIAC
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_expt_1000_bf_scaffold_527_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16871..19189
DNA (2319bp) protein (773aa)
Putative biotin sulfoxide reductase n=1 Tax=Variovorax paradoxus B4 RepID=T1XLC0_VARPD rbh
putative biotin sulfoxide reductase rbh
Putative biotin sulfoxide reductase {ECO:0000313|EMBL:AGU53667.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_1000_bf_scaffold_527_17
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19297..23088
DNA (3792bp) protein (1264aa)
B12-dependent methionine synthase {ECO:0000313|EMBL:EGP45989.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EGP45989.1};; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
5-methyltetrahydrofolate--homocysteine methyltransferase (EC:2.1.1.13) rbh
B12-dependent methionine synthase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T108_ALCXX rbh
SCNpilot_expt_1000_bf_scaffold_527_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23110..23550)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030B32B2
Uncharacterized protein {ECO:0000313|EMBL:EIK88995.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_527_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23581..23721)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIF5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88995.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_527_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23718..24317)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIF4_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK88994.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_527_21
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24387..25409)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUE2_9RHIZ
Ribose operon repressor {ECO:0000313|EMBL:CEL22852.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein; K02529 LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_527_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

25507..26712
DNA (1206bp) protein (402aa)
acyl-CoA transferase/carnitine dehydratase id=14429543 bin=bin3_NC10 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
bile acid-inducible L-carnitine dehydratase
Tax=CSP1_5_NC10
SCNpilot_expt_1000_bf_scaffold_527_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26709..27557
DNA (849bp) protein (283aa)
HpcH/HpaI aldolase (EC:4.1.3.6); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
citryl-CoA lyase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002376517
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_1000_bf_scaffold_527_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27579..28571
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSP2_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00378.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_527_25
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28596..29567
DNA (972bp) protein (324aa)
Extra-cytoplasmic solute receptor n=2 Tax=Burkholderiaceae RepID=R7XCM7_9RALS
MFS transporter {ECO:0000313|EMBL:EYS85412.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
h16_A2779; extra-cytoplasmic solute receptor
SCNpilot_expt_1000_bf_scaffold_527_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29573..30439
DNA (867bp) protein (289aa)
Isocitrate lyase and phosphorylmutase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6Y7_MESOW
isocitrate lyase and phosphorylmutase
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_1000_bf_scaffold_527_27
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30457..30768
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003649BFD
Uncharacterized protein {ECO:0000313|EMBL:KDP85061.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein; K09780 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_527_28
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30775..31707)
DNA (933bp) protein (311aa)
LysR family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVI6_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETF03951.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_527_29
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31755..33023)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXA2_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ETF03950.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_527_30
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33020..35122)
DNA (2103bp) protein (701aa)
hydantoinase A (EC:3.5.2.14) rbh
Hydantoinase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QY46_9BURK rbh
Hydantoinase {ECO:0000313|EMBL:ETF03949.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
Displaying items 1-30 of 252 in total

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