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SCNpilot_expt_1000_bf_scaffold_546

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_546_1
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..235
DNA (234bp) protein (78aa)
Osmolarity response regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F272_9BURK
risA; response regulator protein
Transcriptional regulatory protein OmpR {ECO:0000313|EMBL:KCB36151.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
SCNpilot_expt_1000_bf_scaffold_546_2
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

253..1614
DNA (1362bp) protein (454aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
RisS protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HS27_ACHXA rbh
Osmolarity sensory histidine kinase EnvZ rbh
SCNpilot_expt_1000_bf_scaffold_546_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1664..2221
DNA (558bp) protein (186aa)
ahpC; alkyl hydroperoxide reductase; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Alkyl hydroperoxide reductase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9II51_BORPD
Alkyl hydroperoxide reductase protein C {ECO:0000313|EMBL:CDM23507.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCNpilot_expt_1000_bf_scaffold_546_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..4492)
DNA (2235bp) protein (745aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] rbh
GTP pyrophosphokinase {ECO:0000313|EMBL:CAP42074.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CAP42074.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
GTP pyrophosphokinase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IID5_BORPD rbh
SCNpilot_expt_1000_bf_scaffold_546_5
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4576..5715
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X924_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EFF76654.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Inner membrane protein rbh
SCNpilot_expt_1000_bf_scaffold_546_6
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5841..6737)
DNA (897bp) protein (299aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XES0_9BURK rbh
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EFF74597.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
alpha/beta hydrolase rbh
SCNpilot_expt_1000_bf_scaffold_546_7
unknown

Not on your lists

comp(7095..7784)
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_546_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7850..9166)
DNA (1317bp) protein (439aa)
Eha n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSW7_9PROT rbh
Eha {ECO:0000313|EMBL:CCU62500.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
phage-like protein rbh
SCNpilot_expt_1000_bf_scaffold_546_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9175..10959)
DNA (1785bp) protein (595aa)
Phage transposase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIK1_9PROT
Phage transposase {ECO:0000313|EMBL:CCU62499.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Tn552/IS1604 rve transposase
SCNpilot_expt_1000_bf_scaffold_546_10
unknown

Not on your lists

comp(11014..11775)
DNA (762bp) protein (254aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_546_11
unknown

Not on your lists

comp(12146..13114)
DNA (969bp) protein (323aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_546_12
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13555..13959)
DNA (405bp) protein (135aa)
Gp10 n=3 Tax=root RepID=Q6QID9_BPBMU
BcepMu10; hypothetical protein
Hypothetical phage protein {ECO:0000313|EMBL:CAR57476.1}; TaxID=216591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656; / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315)).;"
SCNpilot_expt_1000_bf_scaffold_546_13
unknown

Not on your lists

comp(14085..14216)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_546_14
unknown

Not on your lists

14382..14747
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_546_15
unknown

Not on your lists

comp(14962..15261)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_546_16
unknown

Not on your lists

15280..15858
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_546_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16425..19067
DNA (2643bp) protein (881aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D884_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EFI60760.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_546_18
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19343..21742)
DNA (2400bp) protein (800aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQW0_BORPD rbh
Competence protein {ECO:0000313|EMBL:AIR52329.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC rbh
SCNpilot_expt_1000_bf_scaffold_546_19
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21840..22649)
DNA (810bp) protein (270aa)
deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] rbh
Putative Deoxyribonuclease n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQW2_BORPD rbh
Putative Deoxyribonuclease {ECO:0000313|EMBL:CAP43104.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_expt_1000_bf_scaffold_546_20
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22675..23370)
DNA (696bp) protein (232aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
lolD; lipoprotein releasing system ATPase component; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030DA6B8
SCNpilot_expt_1000_bf_scaffold_546_21
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23363..24697)
DNA (1335bp) protein (445aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HRC1_ACHXA rbh
lipoprotein releasing system, transmembrane protein, LolC/E family protein; K09808 lipoprotein-releasing system permease protein rbh
Lipoprotein releasing system, transmembrane protein, LolC/E family protein {ECO:0000313|EMBL:ADP17255.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_expt_1000_bf_scaffold_546_22
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24741..25823
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F2B1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHK67522.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_546_23
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25802..27514
DNA (1713bp) protein (571aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:KCV61216.1}; EC=3.1.-.- {ECO:0000313|EMBL:KCV61216.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
recJ; single-stranded-DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] rbh
Single-stranded-DNA-specific exonuclease n=4 Tax=Bordetella RepID=Q7W8T3_BORPA rbh
SCNpilot_expt_1000_bf_scaffold_546_24
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27856..28698
DNA (843bp) protein (281aa)
Peptide chain release factor 2 n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U660_ALCXX
Peptide chain release factor 2; programmed frameshift-containing rbh
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
SCNpilot_expt_1000_bf_scaffold_546_25
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28718..29464
DNA (747bp) protein (249aa)
Short chain dehydrogenase family protein 40 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HRC6_ACHXA
short chain dehydrogenase family protein 40
Short chain dehydrogenase family protein 40 {ECO:0000313|EMBL:ADP17260.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_expt_1000_bf_scaffold_546_26
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29478..31007
DNA (1530bp) protein (510aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6) rbh
Lysine--tRNA ligase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XF04_9BURK rbh
SCNpilot_expt_1000_bf_scaffold_546_27
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31100..32071)
DNA (972bp) protein (324aa)
pyridoxal-5'-phosphate-dependent protein beta subunit; K01754 threonine dehydratase [EC:4.3.1.19] rbh
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JN66_BURP8 rbh
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ACC72914.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
SCNpilot_expt_1000_bf_scaffold_546_28
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32093..33070)
DNA (978bp) protein (326aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12]
Putative ornithine cyclodeaminase, mu-crystallin n=1 Tax=Acidovorax sp. CF316 RepID=J1EJT1_9BURK
Putative ornithine cyclodeaminase, mu-crystallin {ECO:0000313|EMBL:EJE52511.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCNpilot_expt_1000_bf_scaffold_546_29
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33054..33683)
DNA (630bp) protein (210aa)
Putative DNA-binding protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SAS7_9BURK rbh
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG19633.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
YheO-like domain-containing protein
SCNpilot_expt_1000_bf_scaffold_546_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33842..34801
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037CF2B4 rbh
bug; ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 79 in total

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