name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_725_1
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1079)
|
Putative molybdenum-binding protein n=1 Tax=Ralstonia sp. PBA RepID=I9C0A2_9RALS
rbh
Putative molybdenum-binding protein {ECO:0000313|EMBL:EIZ05326.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
putative molybdenum-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_725_2
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1207..2943
|
NAD-dependent formate dehydrogenase flavoprotein subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129S2_POLSJ
rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_expt_1000_bf_scaffold_725_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2945..5755
|
zinc-containing alcohol dehydrogenase (EC:1.1.1.1); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
rbh
formate dehydrogenase subunit alpha n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003097D29
rbh
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:AGW94307.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6056..7513)
|
Succinate-semialdehyde dehdyrogenase {ECO:0000313|EMBL:AIJ45734.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AIJ45734.1};; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
Aldehyde dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B13_RHOPB
aldehyde dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_725_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7510..8697)
|
L-lactate dehydrogenase (EC:1.1.2.3)
L-lactate dehydrogenase {ECO:0000313|EMBL:CCH08551.1}; EC=1.1.2.3 {ECO:0000313|EMBL:CCH08551.1};; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
L-lactate dehydrogenase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XVA9_ALCXX
|
|
SCNpilot_expt_1000_bf_scaffold_725_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8707..9681)
|
Extra-cytoplasmic solute receptor family protein 62 n=2 Tax=Bordetella holmesii RepID=M5NL37_9BORD
Uncharacterized protein {ECO:0000313|EMBL:AIJ49692.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
tctC7; tricarboxylate binding receptor
|
|
SCNpilot_expt_1000_bf_scaffold_725_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9737..10867)
|
mandelate racemase n=1 Tax=Variovorax paradoxus RepID=UPI00037743DB
Variovorax paradoxus strain MEDvA23 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33934.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
mandelate racemase/muconate lactonizing protein
|
|
SCNpilot_expt_1000_bf_scaffold_725_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10885..11856)
|
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00036D5153
rbh
extra-cytoplasmic solute receptor
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_725_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11927..13615)
|
acetolactate synthase catalytic subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
rbh
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00036D2A24
rbh
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
SCNpilot_expt_1000_bf_scaffold_725_10
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13691..14650
|
Miscellaneous not classified regulator n=4 Tax=Ralstonia solanacearum RepID=M4V2C8_RALSL
miscellaneous; not classified regulator
Probable transcriptional regulator transcription regulator protein {ECO:0000313|EMBL:CAD18038.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14695..15930
|
Transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YL15_9RHIZ
Transporter {ECO:0000313|EMBL:EHH03260.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
major facilitator superfamily protein
|
|
SCNpilot_expt_1000_bf_scaffold_725_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15941..16288)
|
Probable transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJI6_THIDA
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ97171.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_13
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16363..17016)
|
Sulfoxide reductase heme-binding subunit YedZ n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QRP3_BORBO
hypothetical protein
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17135..18100)
|
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QKS2_BORBO
rbh
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_725_15
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18279..19607)
|
Putative cytochrome c asssembly protein n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W2C1_BORPA
rbh
Cytochrome c-type biogenesis protein CcsB {ECO:0000313|EMBL:KCV63837.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
cytochrome c asssembly protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_725_16
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19612..21741)
|
Cytochrome c-type biogenesis protein Ccs1/ResB n=3 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XSS8_ALCXX
rbh
Cytochrome c-type biogenesis protein Ccs1/ResB
rbh
Cytochrome C biogenesis protein ResB {ECO:0000313|EMBL:AIR54362.1}; Cytochrome C-type biogenesis transmembrane protein {ECO:0000313|EMBL:EFV82151.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_17
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21866..22546)
|
cytochrome C n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003822C2F
oxidoreductase cytochrome C4 class
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG21236.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_18
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22882..23406
|
Uncharacterized protein n=2 Tax=Ralstonia RepID=D8NVC1_RALSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA79267.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_19
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23479..24102
|
GTP-binding protein EngB n=1 Tax=Advenella kashmirensis W13003 RepID=V8QYT1_9BURK
rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
GTP-binding protein; K03978 GTP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_725_20
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24184..25194
|
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24]
rbh
Delta-aminolevulinic acid dehydratase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SZ55_ALCXX
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_725_21
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25199..26404
|
Mg2+ transporter protein, CorA-like protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGD9_COLFT
rbh
Mg2+ transporter protein, CorA-like protein
rbh
Mg2+ transporter protein, CorA-like protein {ECO:0000313|EMBL:AEK60269.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26408..27523
|
UPI00039AC74E related cluster n=1 Tax=unknown RepID=UPI00039AC74E
DNA-binding HTH domain-containing proteins {ECO:0000313|EMBL:GAD21329.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_725_23
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27537..29462)
|
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399, ECO:0000313|EMBL:CAP45272.1};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precursor;; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Thiol:disulfide interchange protein DsbD n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IHQ9_BORPD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_725_24
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29462..29803)
|
Divalent cation tolerance protein, CutA1 family n=38 Tax=Bordetella RepID=V8U6T8_BORPT
cutA; divalent cation tolerance protein; K03926 periplasmic divalent cation tolerance protein
Divalent cation tolerance protein, CutA1 family {ECO:0000313|EMBL:KDD49058.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_25
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29820..30629)
|
ABC transporter, permease protein n=34 Tax=Bordetella RepID=F4LGX0_BORPC
rbh
nodJ; ABC transporter permease
rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 /; 18323).;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_26
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30631..31596)
|
Nod factor export ATP-binding protein I {ECO:0000256|HAMAP-Rule:MF_01704}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01704};; Nodulation ATP-binding protein I {ECO:0000256|HAMAP-Rule:MF_01704}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253).;"
ABC, transporter, ATP-binding protein n=4 Tax=Bordetella RepID=Q7W9D3_BORPA
rbh
nodI; ABC transporter ATP-binding protein; K09695 lipooligosaccharide transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_725_27
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31743..32840
|
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6BDF7_PSERE
DNA-binding protein {ECO:0000313|EMBL:KJK00523.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_725_28
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33129..34421
|
D-amino acid dehydrogenase (Fragment) n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IUG3_9BURK
rbh
Amino acid dehydrogenase {ECO:0000313|EMBL:KJK21192.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
|
|
SCNpilot_expt_1000_bf_scaffold_725_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34428..36107)
|
Dehydrogenase {ECO:0000313|EMBL:BAQ41439.1}; EC=1.1.1.151 {ECO:0000313|EMBL:BAQ41439.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031EF8A9
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_725_30
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36185..37657)
|
betB1; betaine aldehyde dehydrogenase BetB (EC:1.2.1.8); K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8]
rbh
Betaine aldehyde dehydrogenase BetB {ECO:0000313|EMBL:AEI82570.1}; EC=1.2.1.8 {ECO:0000313|EMBL:AEI82570.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Betaine aldehyde dehydrogenase BetB n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GV70_CUPNN
rbh
|