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SCNpilot_expt_1000_bf_scaffold_2516

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2516_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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241..2073
DNA (1833bp) protein (611aa)
type VI secretion protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E763D
Relaxase type IV secretory pathway VirD2 {ECO:0000313|EMBL:GAD22499.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2516_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2251..4185)
DNA (1935bp) protein (645aa)
Iron permease FTR1 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5E0_ACISJ rbh
Iron permease FTR1 {ECO:0000313|EMBL:ABM41465.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
iron permease FTR1; K07243 high-affinity iron transporter rbh
SCNpilot_expt_1000_bf_scaffold_2516_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4319..4753)
DNA (435bp) protein (145aa)
Transcriptional regulator, MerR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5E1_ACISJ
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABM41466.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_2516_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4840..7239
DNA (2400bp) protein (800aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] rbh
Heavy metal translocating P-type ATPase n=2 Tax=Comamonadaceae RepID=A1W5E2_ACISJ rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABM41467.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_2516_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7236..7640
DNA (405bp) protein (135aa)
signal peptidase II (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Lipoprotein signal peptidase n=2 Tax=Comamonadaceae RepID=A1W5E3_ACISJ
SCNpilot_expt_1000_bf_scaffold_2516_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7719..8315
DNA (597bp) protein (199aa)
signal peptidase II (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Lipoprotein signal peptidase n=2 Tax=Comamonadaceae RepID=A1W5E3_ACISJ
SCNpilot_expt_1000_bf_scaffold_2516_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8371..9285
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIJ7_ACIET rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO21041.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2516_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9311..9538
DNA (228bp) protein (76aa)
UPI0003AA0F2D related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003AA0F2D
Uncharacterized protein {ECO:0000313|EMBL:GAD24976.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2516_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9755..11770
DNA (2016bp) protein (672aa)
TRAG family protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIJ5_ACIET rbh
TRAG family protein {ECO:0000313|EMBL:ACM34933.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
conjugal transfer coupling protein trag; K03205 type IV secretion system protein VirD4 rbh
Displaying 9 items

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