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SCNpilot_expt_1000_bf_scaffold_2520

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2520_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..402
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5P0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10259.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2520_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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443..1516
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2P3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34994.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
UBA/THIF-type NAD/FAD-binding protein
SCNpilot_expt_1000_bf_scaffold_2520_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2081..3436)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5N4_9BRAD rbh
Integrase {ECO:0000313|EMBL:KFC64500.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phage integrase rbh
SCNpilot_expt_1000_bf_scaffold_2520_4
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3738..4694)
DNA (957bp) protein (319aa)
UPI0003D5ED80 related cluster n=1 Tax=unknown RepID=UPI0003D5ED80
Vitamin B12 ABC transporter, B12-binding component BtuF {ECO:0000313|EMBL:AHC44981.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
Vitamin B12 ABC transporter, B12-binding component BtuF
SCNpilot_expt_1000_bf_scaffold_2520_5
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4645..6498)
DNA (1854bp) protein (618aa)
TonB-dependent vitamin B12 receptor (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KUI3_BORA1 rbh
Putative TonB-dependent vitamin B12 receptor {ECO:0000313|EMBL:KCB45795.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
btuB; TonB-dependent vitamin B12 receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_expt_1000_bf_scaffold_2520_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6891..7304)
DNA (414bp) protein (138aa)
nucleoside diphosphate kinase regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F8CD14
Variovorax paradoxus strain MEDvA23 contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ30908.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
SCNpilot_expt_1000_bf_scaffold_2520_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7578..8405)
DNA (828bp) protein (276aa)
Alpha/beta hydrolase fold family protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HVF9_ACHXA
alpha/beta hydrolase
Alpha/beta hydrolase fold family protein 2 {ECO:0000313|EMBL:ADP13824.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_expt_1000_bf_scaffold_2520_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8568..9119
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HYE2_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP40728.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_expt_1000_bf_scaffold_2520_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9124..9381
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9W1_ACIET
hypothetical protein; K06940
Uncharacterized protein {ECO:0000313|EMBL:ACM31532.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_1000_bf_scaffold_2520_10
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9432..10286
DNA (855bp) protein (285aa)
zntA; heavy metal transporting P-type ATPase ZntA (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal transporting P-type ATPase ZntA {ECO:0000313|EMBL:AEI77565.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AEI77565.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
carbonate dehydratase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037C78F1
Displaying 10 items

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