name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1802_1
unknown
|
Not on your lists |
1..123
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1802_2
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
288..1271
|
P-type conjugative transfer ATPase TrbB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNB2_9SPHN
Conjugal transfer protein TrbB {ECO:0000313|EMBL:KIC55727.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1802_3
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1268..1600
|
Conjugal transfer protein TrbC n=2 Tax=Oligotropha carboxidovorans RepID=B6JA74_OLICO
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KIC55728.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
trbC; putative conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
|
|
SCNpilot_expt_1000_bf_scaffold_1802_4
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1600..1881
|
conjugal transfer protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003144824
Conjugal transfer protein {ECO:0000313|EMBL:KIC55729.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3
|
|
SCNpilot_expt_1000_bf_scaffold_1802_5
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1894..4347
|
AAA ATPase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSC9_PARL1
rbh
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KIC55730.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1802_6
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4350..5117
|
conjugal transfer protein TrbJ n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FC56
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KIC55731.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
conjugal transfer protein TrbJ
|
|
SCNpilot_expt_1000_bf_scaffold_1802_7
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5128..5412
|
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ93_BREDI
Conjugal transfer protein TrbK {ECO:0000313|EMBL:KIC55732.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1802_8
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5416..6771
|
Conjugal transfer protein TrbL n=2 Tax=Oligotropha carboxidovorans RepID=B6JA69_OLICO
rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KIC55733.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
trbL; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1802_9
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6768..7457
|
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA68_OLICO
rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KIC55734.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
trbF1; conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1802_10
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7454..8434
|
Conjugal transfer protein TrbG n=2 Tax=Oligotropha carboxidovorans RepID=B6JA67_OLICO
rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KIC55735.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1802_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8431..9603
|
Conjugal transfer protein TrbI n=2 Tax=Oligotropha carboxidovorans RepID=B6JA66_OLICO
rbh
trbI1; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:AEI05059.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1802_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9605..9844
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BHI5_OLICM
hypothetical protein
Uncharacterized conserved small protein-like protein {ECO:0000313|EMBL:ADZ68712.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1802_13
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9777..10766)
|
Transcriptional regulator, LysR family n=3 Tax=Oligotropha carboxidovorans RepID=B6JA65_OLICO
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KIC58072.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
LysR family transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1802_14
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10910..11470)
|
zinc-binding dehydrogenase n=1 Tax=Erwinia carotovora RepID=UPI0001A435D3
Zinc-binding dehydrogenase {ECO:0000313|EMBL:KHT30873.1}; TaxID=555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora; subsp. carotovora).;"
alcohol dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_1802_15
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11467..12663)
|
Drug resistance transporter Bcr/CflA subfamily n=1 Tax=Rhizobium sp. RepID=L0NND8_RHISP
Drug resistance transporter Bcr/CflA subfamily {ECO:0000313|EMBL:CCF22391.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
MFS transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
|
|
SCNpilot_expt_1000_bf_scaffold_1802_16
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13753..14259)
|
UPI0003CF48C9 related cluster n=2 Tax=unknown RepID=UPI0003CF48C9
Transposase {ECO:0000313|EMBL:EJL54191.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
transposase IS116/IS110/IS902; K07486 transposase
|
|
SCNpilot_expt_1000_bf_scaffold_1802_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14329..14919)
|
Transposase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98AJ3_RHILO
transposase; K07486 transposase
Transposase {ECO:0000313|EMBL:BAB52336.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1802_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15171..16367
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000365F58B
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1802_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16377..17639
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003627905
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1802_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17632..18357
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036126B2
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1802_21
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18413..18865
|
MerR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBF3_9PROT
MerR family transcriptional regulator {ECO:0000313|EMBL:EKE67944.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
cueR; DNA-binding transcriptional activator of copper-responsive regulon genes
|
|
SCNpilot_expt_1000_bf_scaffold_1802_22
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18862..19080
|
MerR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBF3_9PROT
MerR family transcriptional regulator {ECO:0000313|EMBL:EKE67944.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
cation translocating P-type ATPase
|
|
SCNpilot_expt_1000_bf_scaffold_1802_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19270..19752
|
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2L7S3_9PROT
hypothetical protein; K06196 cytochrome c-type biogenesis protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|