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SCNpilot_expt_1000_bf_scaffold_7697

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7697_1
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..228)
DNA (228bp) protein (76aa)
XRE family transcriptional regulator n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDU1_ZYMMN
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC55714.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7697_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235..909)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JA91_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05035.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_7697_3
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1284..1724)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA92_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIC55712.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7697_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1862..2029)
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA93_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05033.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_7697_5
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2222..2488
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC55711.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
SCNpilot_expt_1000_bf_scaffold_7697_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2733..3167)
DNA (435bp) protein (145aa)
methyltransferase type 12 n=1 Tax=Ochrobactrum anthropi RepID=UPI000288ED03
Methyltransferase type 12 {ECO:0000313|EMBL:CDX57518.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
methyltransferase type 12
SCNpilot_expt_1000_bf_scaffold_7697_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3316..4242)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA95_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI05032.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_7697_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4589..5629)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BHF6_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05031.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_7697_9
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5629..7551)
DNA (1923bp) protein (641aa)
Probably methylase/helicase n=2 Tax=Oligotropha carboxidovorans RepID=B6JA98_OLICO
Methylase {ECO:0000313|EMBL:KIC55709.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
putative methylase/helicase
SCNpilot_expt_1000_bf_scaffold_7697_10
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7743..9887)
DNA (2145bp) protein (715aa)
Probably methylase/helicase n=2 Tax=Oligotropha carboxidovorans RepID=B6JA98_OLICO
Methylase {ECO:0000313|EMBL:KIC55709.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
methylase/helicase
SCNpilot_expt_1000_bf_scaffold_7697_11
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10046..10690)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA99_OLICO
Antitoxin of toxin-antitoxin stability system {ECO:0000313|EMBL:KIC55708.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7697_12
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10683..11099)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA0_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIC55707.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7697_13
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11163..11720)
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA1_OLICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC55706.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_7697_14
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11829..12050)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA2_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIC55739.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7697_15
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12107..12457)
DNA (351bp) protein (117aa)
ParB domain protein nuclease n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA3_OLICO
DNA-binding protein {ECO:0000313|EMBL:KIC55705.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_7697_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13789..14124
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG10589.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_1000_bf_scaffold_7697_17
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14338..14493)
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA4_OLICO
hypothetical protein
Single-stranded DNA endonuclease {ECO:0000313|EMBL:KIC55704.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
Displaying 17 items

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