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SCNpilot_expt_1000_bf_scaffold_712

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_712_1
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(1..594)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPQ0_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:EPB65617.1}; Flags: Fragment;; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_712_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(746..2506)
DNA (1761bp) protein (587aa)
30S ribosomal protein S1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAY2_FLUTR rbh
30S ribosomal protein S1P; K02945 small subunit ribosomal protein S1 rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_712_3
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2679..3107
DNA (429bp) protein (143aa)
Hydrolase-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BHR8_ZUNPS
hydrolase-like protein
Hydrolase-like protein {ECO:0000313|EMBL:ADF51306.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_expt_1000_bf_scaffold_712_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3101..4123
DNA (1023bp) protein (341aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJE3_FLUTR rbh
magnesium and cobalt transport protein CorA; K03284 magnesium transporter rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_712_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4209..5135)
DNA (927bp) protein (309aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] rbh
Lipid A biosynthesis acyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBM8_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_712_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5135..6418)
DNA (1284bp) protein (428aa)
AAA ATPase central domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBM9_FLUTR rbh
AAA ATPase central domain-containing protein; K07478 putative ATPase rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_712_7
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(6550..7932)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9F2_FLUTR rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_712_8
unknown

Not on your lists

8188..8463
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_712_9
Leeuwenhoekiella blandensis, Leeuwenhoekiella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8523..9170
DNA (648bp) protein (216aa)
Two-component response regulator n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XK00_LEEBM rbh
Two-component response regulator {ECO:0000313|EMBL:EAQ50124.1}; TaxID=398720 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Leeuwenhoekiella.;" source="Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217); (Flavobacterium sp. (strain MED217)).;"
two-component system response regulatory protein, LuxR family rbh
SCNpilot_expt_1000_bf_scaffold_712_10
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9187..10932
DNA (1746bp) protein (582aa)
two-component system sensor histidine kinase (EC:2.7.13.3) rbh
Probable two-component system sensor histidine kinase {ECO:0000313|EMBL:CCG54128.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCG54128.1};; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
Probable two-component system sensor histidine kinase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPR2_FLAIG rbh
SCNpilot_expt_1000_bf_scaffold_712_11
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10946..12805
DNA (1860bp) protein (620aa)
two-component system sensor histidine kinase (EC:2.7.13.3)
Probable two-component system sensor histidine kinase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPR2_FLAIG
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_1000_bf_scaffold_712_12
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12815..13477)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000374BF3F
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AEV31336.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
SCNpilot_expt_1000_bf_scaffold_712_13
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13481..13852)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2A9_FLAB3
Membrane protein {ECO:0000313|EMBL:KFC22030.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein; K08987 putative membrane protein
SCNpilot_expt_1000_bf_scaffold_712_14
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

14054..14314
DNA (261bp) protein (87aa)
Rhodanese-like protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J5B1_CYCMS
rhodanese-like protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_712_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14314..14622
DNA (309bp) protein (103aa)
Rhodanese-like protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID78_FLUTR
Rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AEA45493.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_712_16
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14670..15584)
DNA (915bp) protein (305aa)
TIGR01777 family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JVH9_9FLAO rbh
TIGR01777 family protein {ECO:0000313|EMBL:EJL71880.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein; K07071
SCNpilot_expt_1000_bf_scaffold_712_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15596..17416)
DNA (1821bp) protein (607aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44) rbh
Xenobiotic-transporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHM5_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_712_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


17588..17749
DNA (162bp) protein (54aa)
50S ribosomal protein L34 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHM6_FLUTR
50S ribosomal protein L34P; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_712_19
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17871..18779)
DNA (909bp) protein (303aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPW8_EMTOG rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AFK01721.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_expt_1000_bf_scaffold_712_20
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18779..19372)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RQB4_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ18322.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCNpilot_expt_1000_bf_scaffold_712_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19372..19776)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VS31_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94552.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_712_22

Not on your lists

19916..20554
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003787A8C
Uncharacterized protein {ECO:0000313|EMBL:KKN82518.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_712_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20551..21402
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036068E1 rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_712_24
unknown

Not on your lists

comp(21421..22017)
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_712_25
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22048..22542)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEQ5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45622.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_712_26
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22539..23777)
DNA (1239bp) protein (413aa)
Nucleoside recognition domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEQ4_FLUTR rbh
nucleoside recognition domain-containing protein rbh
Nucleoside recognition domain protein {ECO:0000313|EMBL:AEA45621.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_712_27
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23804..24373)
DNA (570bp) protein (190aa)
Glutamine amidotransferase class-I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEQ3_FLUTR
glutamine amidotransferase class-I
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_712_28
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24375..24992)
DNA (618bp) protein (206aa)
Translation factor SUA5 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEQ2_FLUTR
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Translation factor SUA5 {ECO:0000313|EMBL:AEA45619.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_712_29
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25063..25959)
DNA (897bp) protein (299aa)
Cation efflux system protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SDY9_9FLAO rbh
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:KGO96648.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
cation efflux system protein rbh
SCNpilot_expt_1000_bf_scaffold_712_30
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(25990..26778)
DNA (789bp) protein (263aa)
Beta-propeller domain-containing protein, methanol dehydrogenase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FXQ5_ECHVK
methanol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Displaying items 1-30 of 60 in total

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