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SCNpilot_expt_1000_bf_scaffold_930

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_930_1
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..1502
DNA (1500bp) protein (500aa)
Putative aminopeptidase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICJ8_FLUTR
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AEA45468.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_930_2
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1550..2089
DNA (540bp) protein (180aa)
Transcriptional regulator, AraC family n=2 Tax=Bacteroidetes RepID=F0S649_PEDSD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADY52152.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_930_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

2144..3256
DNA (1113bp) protein (371aa)
MORN repeat-containing protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VQF0_9CYAN
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_expt_1000_bf_scaffold_930_4
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3268..3717
DNA (450bp) protein (150aa)
Transcription activator effector binding protein n=3 Tax=Riemerella anatipestifer RepID=E4TDW1_RIEAD
transcription activator effector binding protein
Uncharacterized protein {ECO:0000313|EMBL:AFD55040.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
SCNpilot_expt_1000_bf_scaffold_930_5
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3818..6235
DNA (2418bp) protein (806aa)
Cation-transporting ATPase PacS {ECO:0000313|EMBL:CDT31706.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDT31706.1};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Copper-translocating P-type ATPase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S650_PEDSD rbh
SCNpilot_expt_1000_bf_scaffold_930_6
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6522..6758
DNA (237bp) protein (79aa)
ArsR family transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI000370708C
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGD67806.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
regulatory protein ArsR
SCNpilot_expt_1000_bf_scaffold_930_7
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6761..7324
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F89FB
Uncharacterized protein {ECO:0000313|EMBL:KFF12205.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_930_8
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7335..7838
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382C695
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ADZ81522.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_930_9
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7945..8622
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF08_SPHS2 rbh
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:GAL83650.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
winged helix family two component transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_930_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8679..9959
DNA (1281bp) protein (427aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Signal transduction histidine kinase n=1 Tax=Joostella marina DSM 19592 RepID=I3CA57_9FLAO rbh
signal transduction histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_930_11
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10001..10801
DNA (801bp) protein (267aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XMB4_LEEBM
Uncharacterized protein {ECO:0000313|EMBL:KFE99926.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
phosphoribosylformylglycinamidine synthase
SCNpilot_expt_1000_bf_scaffold_930_12
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10865..11344
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF10_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KGO87181.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_930_13
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11495..12157
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W9T9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGO87180.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_930_14
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12213..13127
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CIP 101113 RepID=H1H8P0_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EHO09190.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
alpha/beta hydrolase
SCNpilot_expt_1000_bf_scaffold_930_15
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13235..13453
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003621392
Uncharacterized protein {ECO:0000313|EMBL:KFF15048.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_930_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13459..15084)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID32_FLUTR rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_930_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15087..16358)
DNA (1272bp) protein (424aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] rbh
Adenylosuccinate synthetase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID31_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_930_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16358..16696)
DNA (339bp) protein (113aa)
Anti-sigma factor antagonist n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1F1_CYCMS
anti-anti-sigma factor
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_930_19
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16708..17178)
DNA (471bp) protein (157aa)
Ferric uptake regulator, Fur family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID29_FLUTR
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:AEA44423.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_930_20
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17432..19465
DNA (2034bp) protein (678aa)
Dipeptidyl-peptidase III (EC:3.4.14.4); K01277 dipeptidyl-peptidase III [EC:3.4.14.4] rbh
Dipeptidyl-peptidase III n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE06_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_930_21
unknown

Not on your lists

19543..20625
DNA (1083bp) protein (361aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_930_22
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20701..22017
DNA (1317bp) protein (439aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK96_FLUTR rbh
MiaB-like tRNA modifying enzyme rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_930_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22030..22872
DNA (843bp) protein (281aa)
Cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHR3_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_930_24
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22826..23155
DNA (330bp) protein (110aa)
Cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase {ECO:0000313|EMBL:AEA44841.1}; EC=2.8.1.7 {ECO:0000313|EMBL:AEA44841.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Cysteine desulfurase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHR3_FLUTR
SCNpilot_expt_1000_bf_scaffold_930_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

23162..24334
DNA (1173bp) protein (391aa)
Glycosyl transferase group 1 id=1883821 bin=GWE2_Bacteroidetes_32_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
glycosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_expt_1000_bf_scaffold_930_26
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

24324..25613
DNA (1290bp) protein (430aa)
Uncharacterized protein id=1883822 bin=GWE2_Bacteroidetes_32_14 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
membrane protein involved in the export of O-antigen and teichoic acid
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_expt_1000_bf_scaffold_930_27
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25621..26550)
DNA (930bp) protein (310aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] rbh
Aspartate carbamoyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA83_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_930_28
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(26543..27091)
DNA (549bp) protein (183aa)
Bifunctional protein pyrR (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
Bifunctional protein PyrR n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA82_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_930_29
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27128..27445
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382EB5A
Uncharacterized protein {ECO:0000313|EMBL:KFC19926.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_930_30
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27427..27726
DNA (300bp) protein (100aa)
Plasmid stabilization system protein, RelE/ParE family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W132_9FLAO
addiction module toxin, rele/stbe family
Tax=BJP_IG2102_Flavobacteriales_34_12
Displaying items 1-30 of 63 in total

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