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SCNpilot_expt_1000_bf_scaffold_998

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_998_1
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(2..4594)
DNA (4593bp) protein (1531aa)
hypothetical protein, partial n=1 Tax=Cytophaga aurantiaca RepID=UPI000377E963
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
SCNpilot_expt_1000_bf_scaffold_998_2
unknown

Not on your lists

comp(4946..5476)
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_998_3
unknown

Not on your lists

comp(5478..5885)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_998_4
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5903..7252)
DNA (1350bp) protein (450aa)
PKD domain protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1E1_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:AIZ63635.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
PKD domain-containing protein
SCNpilot_expt_1000_bf_scaffold_998_5
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7526..8164)
DNA (639bp) protein (213aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Imtechella halotolerans K1 RepID=I0WJQ8_9FLAO rbh
SCNpilot_expt_1000_bf_scaffold_998_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8189..9790)
DNA (1602bp) protein (534aa)
membrane protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000377E3B0 rbh
sulfate transporter rbh
Sulphate transporter {ECO:0000313|EMBL:ACT94146.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_998_7
unknown

Not on your lists

comp(10191..10481)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_998_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10533..11048)
DNA (516bp) protein (172aa)
Rod shape-determining protein MreD n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ16_FLUTR
rod shape-determining protein MreD
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_998_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11045..11884)
DNA (840bp) protein (280aa)
Rod shape-determining protein MreC n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ15_FLUTR
Rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_998_10
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11946..12971)
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ24_FLUTR rbh
cell shape determining protein, MreB/Mrl family; K03569 rod shape-determining protein MreB and related proteins rbh
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:AEA43882.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_998_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13059..14591)
DNA (1533bp) protein (511aa)
phosphoribosylaminoimidazolecarboxamideformyl transferase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] rbh
Phosphoribosylaminoimidazolecarboxamideformyltra nsferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ23_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_998_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14594..15193)
DNA (600bp) protein (200aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ25_FLUTR
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_998_13
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15200..15769)
DNA (570bp) protein (190aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
phosphoribosylglycinamide formyltransferase n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559533
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
SCNpilot_expt_1000_bf_scaffold_998_14
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(15831..17105)
DNA (1275bp) protein (425aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] rbh
Phosphoribosylamine--glycine ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIB8_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_998_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17121..17807)
DNA (687bp) protein (229aa)
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=755732 species=
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIB7_FLUTR rbh
SCNpilot_expt_1000_bf_scaffold_998_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17864..18832)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIB6_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43825.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_998_17
unknown

Not on your lists

18948..19193
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_998_18
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

19243..19911
DNA (669bp) protein (223aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=1853934 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_40_10
SCNpilot_expt_1000_bf_scaffold_998_19
unknown

Not on your lists

20100..20651
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_998_20
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20761..21606)
DNA (846bp) protein (282aa)
MORN variant repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS0_FLUTR
MORN variant repeat-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_998_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21691..22662)
DNA (972bp) protein (324aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103) rbh
L-threonine 3-dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS1_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_998_22
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22896..24056
DNA (1161bp) protein (387aa)
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] rbh
Homogentisate 1,2-dioxygenase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XS35_FLAIG rbh
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:KGO89199.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
SCNpilot_expt_1000_bf_scaffold_998_23
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24080..25243
DNA (1164bp) protein (388aa)
hppD; 4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] rbh
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z420_FLABF rbh
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KGO89200.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
SCNpilot_expt_1000_bf_scaffold_998_24
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

25357..25671
DNA (315bp) protein (105aa)
Prevent-host-death family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN13_SOLCM
prevent-host-death family protein
Tax=CG_Bacteroid_01
SCNpilot_expt_1000_bf_scaffold_998_25
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

25671..25925
DNA (255bp) protein (85aa)
Putative addiction module toxin, Txe/YoeB n=1 Tax=Cellvibrio sp. BR RepID=I3IC37_9GAMM
toxin-antitoxin system, toxin component, Txe/YoeB family
Tax=CG_Bacteroid_01
SCNpilot_expt_1000_bf_scaffold_998_26
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26037..27575)
DNA (1539bp) protein (513aa)
Propionyl-CoA carboxylase (EC:6.4.1.3); K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3] rbh
Propionyl-CoA carboxylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEC9_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_998_27
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(27595..28959)
DNA (1365bp) protein (455aa)
DNA repair protein radA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEH1_FLUTR rbh
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_998_28
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

29017..30675
DNA (1659bp) protein (553aa)
Putative sugar-transporting permease id=2717120 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
sugar-transporting permease; K02429 MFS transporter, FHS family, L-fucose permease
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_998_29
unknown

Not on your lists

comp(33287..33508)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_998_30
unknown

Not on your lists

comp(35753..35992)
DNA (240bp) protein (80aa)

This feature has no annotations

Displaying 30 items

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