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SCNpilot_expt_1000_bf_scaffold_2161

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2161_1
unknown

Not on your lists

2..268
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2161_2
unknown

Not on your lists

comp(435..1868)
DNA (1434bp) protein (478aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2161_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1934..2500
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGL3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42619.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_2161_4
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2603..3637)
DNA (1035bp) protein (345aa)
Protein RecA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGN3_FLUTR rbh
Protein recA; K03553 recombination protein RecA rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_2161_5
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3699..4169)
DNA (471bp) protein (157aa)
peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY1_CHIPD
Thiol peroxidase {ECO:0000313|EMBL:KFD39535.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
SCNpilot_expt_1000_bf_scaffold_2161_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4486..4989)
DNA (504bp) protein (168aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C8_FLUTR
OmpA/MotB domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_2161_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5015..6559)
DNA (1545bp) protein (515aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C8_FLUTR rbh
OmpA/MotB domain-containing protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_2161_8
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(6698..7729)
DNA (1032bp) protein (344aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] rbh
Pseudouridine synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C7_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_2161_9
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(7782..8087)
DNA (306bp) protein (102aa)
FeS assembly SUF system protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A5_FLUTR
FeS assembly SUF system protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_2161_10
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8084..8509)
DNA (426bp) protein (142aa)
Cysteine desulfuration protein SufE n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A6_FLUTR
Cysteine desulfuration protein SufE; K02426 cysteine desulfuration protein SufE
Cysteine desulfuration protein SufE {ECO:0000313|EMBL:AEA44063.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_2161_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8509..9744)
DNA (1236bp) protein (412aa)
cysteine desulfurase (EC:2.8.1.7 4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] rbh
Cysteine desulfurase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A7_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_2161_12
unknown

Not on your lists

comp(9936..10652)
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2161_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10882..11640
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKC4_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44027.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_2161_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11643..12644
DNA (1002bp) protein (334aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKC5_FLUTR
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein {ECO:0000313|EMBL:AEA44028.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_2161_15
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12942..16238)
DNA (3297bp) protein (1099aa)
PKD domain containing protein id=4534882 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
PKD domain-containing protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_2161_16
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

16384..16614
DNA (231bp) protein (77aa)
Fe2+ transport system protein A n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UBL5_FERPD
Fe2+ transport system protein A; K04758 ferrous iron transport protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:AFG34908.1}; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium pennivorans (strain DSM 9078 / Ven5).;"
SCNpilot_expt_1000_bf_scaffold_2161_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16607..18526
DNA (1920bp) protein (640aa)
Ferrous iron transport protein B n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF43_FLUTR rbh
ferrous iron transport protein B; K04759 ferrous iron transport protein B rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:AEA43517.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_2161_18
unknown

Not on your lists

18526..18636
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2161_19
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

18832..21192
DNA (2361bp) protein (787aa)
Copper-exporting ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Copper-exporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH9_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_2161_20
unknown

Not on your lists

comp(21157..21291)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2161_21
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21479..22366
DNA (888bp) protein (296aa)
cytochrome c oxidase, cbb3-type subunit I (EC:1.9.3.1); K15862 cytochrome c oxidase cbb3-type subunit I/II [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:AEA45102.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEA45102.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH6_FLUTR
SCNpilot_expt_1000_bf_scaffold_2161_22
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22483..23712
DNA (1230bp) protein (410aa)
cytochrome c oxidase, cbb3-type subunit I (EC:1.9.3.1); K15862 cytochrome c oxidase cbb3-type subunit I/II [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:AEA45102.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEA45102.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH6_FLUTR
SCNpilot_expt_1000_bf_scaffold_2161_23
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23718..23921
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45101.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_2161_24
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

23926..25071
DNA (1146bp) protein (382aa)
Cytochrome c class I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH4_FLUTR rbh
cytochrome c class I; K00406 cytochrome c oxidase cbb3-type subunit III rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_2161_25
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

25085..26479
DNA (1395bp) protein (465aa)
Cytochrome c oxidase accessory protein CcoG n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH3_FLUTR rbh
cytochrome c oxidase accessory protein CcoG rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_2161_26
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

26491..26910
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH2_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_2161_27
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26913..27659
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248EBC3
hypothetical protein; K09792 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45097.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_2161_28
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

27704..28420
DNA (717bp) protein (239aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKI1_FLUTR
Crp/Fnr family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_2161_29
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28510..30093
DNA (1584bp) protein (528aa)
Glutamate synthase family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRE3_SOLCM
glutamate synthase family protein
Glutamate synthase family protein {ECO:0000313|EMBL:AFD07468.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_2161_30
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30134..30568
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
Peptidylprolyl isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CER2_9FLAO
Displaying items 1-30 of 39 in total

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