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SCNpilot_expt_1000_bf_scaffold_1016

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1016_1
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..612
DNA (612bp) protein (204aa)
Chaperone protein DnaJ n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICL7_FLUTR
Chaperone protein dnaJ; K03686 molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1016_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(685..2289)
DNA (1605bp) protein (535aa)
fumarase (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2] rbh
Fumarase {ECO:0000313|EMBL:AEA42383.1}; EC=4.2.1.2 {ECO:0000313|EMBL:AEA42383.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Fumarase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE65_FLUTR rbh
SCNpilot_expt_1000_bf_scaffold_1016_3
unknown

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2426..2665
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1016_4
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2681..3223
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2L5_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41307.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;"
SCNpilot_expt_1000_bf_scaffold_1016_5
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3267..7013)
DNA (3747bp) protein (1249aa)
Conserved repeat protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPY5_9SPHI rbh
Conserved repeat protein {ECO:0000313|EMBL:EFK55836.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1016_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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7169..8623
DNA (1455bp) protein (485aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-); K00599 [EC:2.1.1.-] rbh
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICP7_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1016_7
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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8791..9669
DNA (879bp) protein (293aa)
hypothetical protein MinjM_02055 id=1786991 bin=GWE2_Bacteroidetes_32_14 species=Myroides injenensis genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_expt_1000_bf_scaffold_1016_8
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9733..10692)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID55_FLUTR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA44449.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1016_9
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10821..12284)
DNA (1464bp) protein (488aa)
aldehyde dehydrogenase (NAD(+)) (EC:1.2.1.3); K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
NAD-dependent aldehyde dehydrogenase n=1 Tax=Joostella marina DSM 19592 RepID=I3C3U7_9FLAO
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EIJ38290.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
SCNpilot_expt_1000_bf_scaffold_1016_10
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12319..12573)
DNA (255bp) protein (85aa)
phosphoribosylformylglycinamidine synthase PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID53_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1016_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12578..13366)
DNA (789bp) protein (263aa)
Phosphatidylserine synthase id=3825605 bin=GWF2_Bacteroidetes_33_16 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
phosphatidylserine synthase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1016_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13482..14606
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID51_FLUTR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA44445.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1016_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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14603..19744
DNA (5142bp) protein (1714aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID50_FLUTR rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1016_14
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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19745..21373
DNA (1629bp) protein (543aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE48_FLUTR rbh
type I phosphodiesterase/nucleotide pyrophosphatase rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1016_15
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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21406..21921
DNA (516bp) protein (172aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID46_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying 15 items

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