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SCNpilot_expt_1000_bf_scaffold_1046

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Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1046_1
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..915
DNA (915bp) protein (305aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
DNA primase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICM7_FLUTR
SCNpilot_expt_1000_bf_scaffold_1046_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1010..1297
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHG9_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43734.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1303..1650
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHG8_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43733.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_4
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(1729..2142)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CL43_9FLAO
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1046_5
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2290..3066
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase/isomerase (EC:4.2.1.55); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA43570.1}; EC=4.2.1.55 {ECO:0000313|EMBL:AEA43570.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Enoyl-CoA hydratase/isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF96_FLUTR rbh
SCNpilot_expt_1000_bf_scaffold_1046_6
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3067..4524
DNA (1458bp) protein (486aa)
Polysaccharide biosynthesis protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF97_FLUTR rbh
polysaccharide biosynthesis protein rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEA43571.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_7
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4521..5363
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN05_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD09084.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_1046_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5535..7331
DNA (1797bp) protein (599aa)
Elongation factor 4 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHG5_FLUTR rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1046_9
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7619..7966
DNA (348bp) protein (116aa)
Helix-turn-helix domain-containing protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WE50_9FLAO
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EID74666.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
addiction module antitoxin transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1046_10
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7960..9240
DNA (1281bp) protein (427aa)
HIPA PROTEIN n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DCS9_9BACT rbh
HIPA PROTEIN {ECO:0000313|EMBL:EOZ96977.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
HipA-like protein rbh
SCNpilot_expt_1000_bf_scaffold_1046_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9449..9889
DNA (441bp) protein (147aa)
TonB family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC24_FLUTR
TonB family protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1046_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9834..10319
DNA (486bp) protein (162aa)
TonB family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAH0_FLUTR
TonB family protein; K03832 periplasmic protein TonB
TonB family protein {ECO:0000313|EMBL:AEA43106.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10699..11850)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFY4_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1046_14
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(11850..13289)
DNA (1440bp) protein (480aa)
Membrane protein involved in the export of O-antigen and teichoic acid id=3843132 bin=GWF2_Bacteroidetes_33_38 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
membrane protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1046_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13369..14496
DNA (1128bp) protein (376aa)
Glycosyl transferase group 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ09_FLUTR rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA43867.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14584..15996)
DNA (1413bp) protein (471aa)
Cell cycle protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ18_FLUTR rbh
cell cycle protein; K05837 rod shape determining protein RodA rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1046_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15989..17902)
DNA (1914bp) protein (638aa)
penicillin-binding protein 2 (EC:2.4.1.129); K05515 penicillin-binding protein 2 rbh
Penicillin-binding protein 2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ17_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1046_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18074..18655)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGP9_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1046_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18835..20340
DNA (1506bp) protein (502aa)
ATP synthase F1 subcomplex subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAH5_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1046_20
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20352..20642
DNA (291bp) protein (97aa)
ATPase; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATPase, F1 complex, delta/epsilon subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAH6_FLUTR
ATPase, F1 complex, delta/epsilon subunit {ECO:0000313|EMBL:AEA43112.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_21
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20761..21510
DNA (750bp) protein (250aa)
Undecaprenyl pyrophosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] rbh
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Isoprenyl transferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAH7_FLUTR rbh
SCNpilot_expt_1000_bf_scaffold_1046_22
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

21507..23498
DNA (1992bp) protein (664aa)
Outer membrane protein assembly complex, YaeT protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAH8_FLUTR rbh
outer membrane protein assembly complex, YaeT protein; K07277 outer membrane protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1046_23
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23589..24095
DNA (507bp) protein (169aa)
Outer membrane protein assembly complex, YaeT protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAH8_FLUTR
outer membrane protein assembly complex, YaeT protein; K07277 outer membrane protein
Outer membrane protein assembly complex, YaeT protein {ECO:0000313|EMBL:AEA43114.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_24
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24099..24614
DNA (516bp) protein (172aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAH9_FLUTR
outer membrane chaperone Skp; K06142 outer membrane protein
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:AEA43115.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_25
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

24634..25152
DNA (519bp) protein (173aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAI0_FLUTR
outer membrane chaperone Skp; K06142 outer membrane protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1046_26
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25500..26096)
DNA (597bp) protein (199aa)
Amino acid/peptide transporter n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICC7_FLUTR
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
Amino acid/peptide transporter {ECO:0000313|EMBL:AEA44373.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_27
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26105..27358)
DNA (1254bp) protein (418aa)
Amino acid/peptide transporter n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICC7_FLUTR rbh
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:AEA44373.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1046_28
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27453..29234)
DNA (1782bp) protein (594aa)
Amino acid/peptide transporter n=2 Tax=Myroides RepID=H1ZD10_MYROD rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:EHQ42950.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
transporter yclF; K03305 proton-dependent oligopeptide transporter, POT family rbh
SCNpilot_expt_1000_bf_scaffold_1046_29
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29304..29939
DNA (636bp) protein (212aa)
hypothetical protein; K03424 TatD DNase family protein [EC:3.1.21.-]
TatD-related DNase n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RFZ8_9BACT
TatD-related DNase {ECO:0000313|EMBL:CCF99959.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
SCNpilot_expt_1000_bf_scaffold_1046_30
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29988..30755
DNA (768bp) protein (256aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICC5_FLUTR rbh
UBA/THIF-type NAD/FAD-binding protein rbh
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:AEA44371.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying items 1-30 of 78 in total

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