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SCNpilot_expt_1000_bf_scaffold_1707

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1707_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..672
DNA (672bp) protein (224aa)
Cobalamin B12-binding domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE89_PEDSD
cobalamin B12-binding domain-containing protein
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:ADY54011.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_1707_2
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

800..1783
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YYE5_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL78921.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_expt_1000_bf_scaffold_1707_3
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1923..3131
DNA (1209bp) protein (403aa)
Exonuclease SbcCD, D subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWQ5_9FLAO rbh
DNA repair exonuclease {ECO:0000313|EMBL:KFE98861.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
nuclease SbcCD subunit D; K03547 exonuclease SbcD rbh
SCNpilot_expt_1000_bf_scaffold_1707_4
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3133..6174
DNA (3042bp) protein (1014aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00038199AC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE98860.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
SMC domain-containing protein; K03546 exonuclease SbcC rbh
SCNpilot_expt_1000_bf_scaffold_1707_5

Not on your lists

comp(6238..6756)
DNA (519bp) protein (173aa)
GNAT family acetyltransferase n=1 Tax=Pontibacter roseus RepID=UPI000370493F
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AIA10482.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GCN5-related N-acetyltransferase
SCNpilot_expt_1000_bf_scaffold_1707_6
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6753..8021)
DNA (1269bp) protein (423aa)
CIC family chloride channel protein n=2 Tax=Myroides odoratimimus RepID=S3Y637_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EHO10965.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
Cl-channel voltage-gated family protein; K03281 chloride channel protein, CIC family rbh
SCNpilot_expt_1000_bf_scaffold_1707_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8156..9412)
DNA (1257bp) protein (419aa)
Cys/Met metabolism PLP-dependent enzyme (EC:4.4.1.11) rbh
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26GX1_FLABB rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_8
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9520..10044
DNA (525bp) protein (175aa)
Leucine-responsive regulatory protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N4I6_9BACT
AsnC family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
SCNpilot_expt_1000_bf_scaffold_1707_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10239..11186
DNA (948bp) protein (316aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] rbh
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGW0_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_10
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11219..12499
DNA (1281bp) protein (427aa)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] rbh
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGW1_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_11
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(13874..14674)
DNA (801bp) protein (267aa)
Cleaved adhesin domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICG6_FLUTR
Cleaved adhesin domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1707_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14686..15174)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICG7_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_13
unknown

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comp(15143..16060)
DNA (918bp) protein (306aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1707_14
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16143..17978)
DNA (1836bp) protein (612aa)
Membrane protein insertase YidC n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID65_FLUTR rbh
Membrane protein oxaA; K03217 preprotein translocase subunit YidC rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_15
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17981..19618)
DNA (1638bp) protein (546aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] rbh
CTP synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID64_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_16
unknown

Not on your lists

19870..20046
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1707_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21252..22034
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBS9_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_18
unknown

Not on your lists

comp(22108..23169)
DNA (1062bp) protein (354aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1707_19
unknown

Not on your lists

comp(23173..23799)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1707_20
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23967..24773)
DNA (807bp) protein (269aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobact
N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
Glucokinase regulatory protein, sugar phosphate isomerase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SJH7_9FLAO
SCNpilot_expt_1000_bf_scaffold_1707_21
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(24773..25267)
DNA (495bp) protein (165aa)
phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
Phosphoribosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA66_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1707_22
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25258..25869)
DNA (612bp) protein (204aa)
WbqC-like family protein n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P239_WEEVC
WbqC-like family protein
WbqC-like family protein {ECO:0000313|EMBL:ADX68767.1}; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
SCNpilot_expt_1000_bf_scaffold_1707_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25869..27752)
DNA (1884bp) protein (628aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] rbh
Signal peptidase I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDY1_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_24
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27749..28477)
DNA (729bp) protein (243aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
Dihydrodipicolinate reductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDY0_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_25
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28477..29091)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDX9_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_26
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29096..29425)
DNA (330bp) protein (110aa)
ParB-like partition protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDX8_FLUTR
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
ParB-like partition protein {ECO:0000313|EMBL:AEA45542.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1707_27
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30023..30835)
DNA (813bp) protein (271aa)
Chromosome segregation ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDX7_FLUTR rbh
chromosome segregation ATPase; K03496 chromosome partitioning protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_28
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(30924..31190)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDX6_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1707_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31218..32330)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDC4_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_1707_30
unknown

Not on your lists

32467..32913
DNA (447bp) protein (149aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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