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SCNpilot_expt_1000_bf_scaffold_1710

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1710_1
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2..802)
DNA (801bp) protein (267aa)
Glycosyl transferase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G0Z8_ECHVK
Beta-1,3-N-acetylglucosaminyltransferase {ECO:0000313|EMBL:BAP29227.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
glycosyl transferase family protein
SCNpilot_expt_1000_bf_scaffold_1710_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(795..2567)
DNA (1773bp) protein (591aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG97_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27361.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_1710_3
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(2564..3769)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B66CED rbh
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADV46969.1}; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifractor.;" source="Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1).;"
SCNpilot_expt_1000_bf_scaffold_1710_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3766..5187)
DNA (1422bp) protein (474aa)
Polysaccharide biosynthesis protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG96_9SPHI
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EHQ27360.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_1710_5
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5191..6180)
DNA (990bp) protein (330aa)
Putative colanic biosynthesis UDP-glucose lipid carrier transferase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LM94_9BACT
Putative colanic biosynthesis UDP-glucose lipid carrier transferase {ECO:0000313|EMBL:EJF10553.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase
SCNpilot_expt_1000_bf_scaffold_1710_6
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6270..7142)
DNA (873bp) protein (291aa)
ATP synthase F1 subcomplex subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] rbh
ATP synthase gamma chain n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAL5_FLUTR rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1710_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7187..8761)
DNA (1575bp) protein (525aa)
ATP synthase F1 subcomplex subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] rbh
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
ATP synthase subunit alpha n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAL7_FLUTR rbh
SCNpilot_expt_1000_bf_scaffold_1710_8
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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comp(8796..9329)
DNA (534bp) protein (178aa)
ATP synthase subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAL8_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_1000_bf_scaffold_1710_9
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9337..9831)
DNA (495bp) protein (165aa)
ATP synthase F0 subcomplex B subunit; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAL9_FLUTR
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1710_10
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9929..10141)
DNA (213bp) protein (71aa)
ATP synthase F0 subcomplex C subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase F0 subcomplex C subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAM0_FLUTR
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1710_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10175..11272)
DNA (1098bp) protein (366aa)
ATP synthase subunit a; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] rbh
ATP synthase subunit a n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAM1_FLUTR rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_1710_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11476..12444
DNA (969bp) protein (323aa)
trans-hexaprenyltranstransferase (EC:2.5.1.30); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] rbh
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:AEA42252.1}; EC=2.5.1.30 {ECO:0000313|EMBL:AEA42252.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Trans-hexaprenyltranstransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICM5_FLUTR rbh
SCNpilot_expt_1000_bf_scaffold_1710_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12441..12869
DNA (429bp) protein (143aa)
MORN variant repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICM6_FLUTR
MORN variant repeat-containing protein
MORN variant repeat-containing protein {ECO:0000313|EMBL:AEA42253.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying 13 items

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