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SCNpilot_expt_1000_bf_scaffold_386

Search features with annotation key words

Displaying items 1-30 of 189 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_386_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200..2566
DNA (2367bp) protein (789aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000361576C rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD22278.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cellulose synthase regulator protein rbh
SCNpilot_expt_1000_bf_scaffold_386_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2559..3725
DNA (1167bp) protein (389aa)
endo-1,4-D-glucanase (EC:3.2.1.4); K01179 endoglucanase [EC:3.2.1.4] rbh
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EEC0C
Endoglucanase Y {ECO:0000313|EMBL:GAD22277.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_386_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3722..7492
DNA (3771bp) protein (1257aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003668CB4 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD22276.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
bcsC; cellulose synthase subunit C rbh
SCNpilot_expt_1000_bf_scaffold_386_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7494..9275
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A9BEC rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD22275.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
bcsE; putative protease involved in cellulose biosynthesis
SCNpilot_expt_1000_bf_scaffold_386_5
unknown

Not on your lists

9272..9424
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_386_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9426..10178
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036BE753
Uncharacterized protein {ECO:0000313|EMBL:GAD22273.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
putative cellulose biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_386_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10178..12733
DNA (2556bp) protein (852aa)
cellulose synthase catalytic subunit; K00694 cellulose synthase (UDP-forming) [EC:2.4.1.12] rbh
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035EA22A rbh
Glycosyltransferases, probably involved in cell wall biogenesis {ECO:0000313|EMBL:GAD22272.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_386_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12730..14298
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003822F6D rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD22271.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_386_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14592..15320
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003731116
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:GAD21955.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_386_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15323..15919
DNA (597bp) protein (199aa)
Cobalt transport protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSN4_ALIDB
ABC transporter permease {ECO:0000313|EMBL:GAO22900.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
ABC transporter permease; K02008 cobalt/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_386_11
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15938..16486)
DNA (549bp) protein (183aa)
peptide methionine sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJF8_ACIET
SCNpilot_expt_1000_bf_scaffold_386_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16611..17318
DNA (708bp) protein (236aa)
protein-l-isoaspartate(d-aspartate) o-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
protein-L-isoaspartate O-methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E90B2
Protein-L-isoaspartate carboxylmethyltransferase {ECO:0000313|EMBL:GAD22527.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_386_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17335..17673
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000370E4CA
rhodanese domain-containing protein
Rhodanese domain-containing protein {ECO:0000313|EMBL:AFU46040.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_386_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17892..18485)
DNA (594bp) protein (198aa)
Resolvase, N-terminal domain protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TPT3_ACIAC
resolvase domain-containing protein
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:ABM32971.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_expt_1000_bf_scaffold_386_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19073..20149)
DNA (1077bp) protein (359aa)
zonular occludens toxin id=12549926 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Zonula occludens toxin {ECO:0000313|EMBL:EIK89656.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
zonular occludens toxin
SCNpilot_expt_1000_bf_scaffold_386_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20146..20430)
DNA (285bp) protein (95aa)
ABC-type Co2+ transport system, permease component id=12549928 bin=BDI species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EIK89657.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_386_17
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20433..21638)
DNA (1206bp) protein (402aa)
id=12549930 bin=BDI tax=BDI organism_group=Betaproteobacteria
Surface-anchored protein {ECO:0000313|EMBL:KJQ62972.1}; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_386_18
unknown

Not on your lists

comp(22052..22294)
DNA (243bp) protein (81aa)
id=12549932 bin=BDI tax=BDI organism_group=Betaproteobacteria
SCNpilot_expt_1000_bf_scaffold_386_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22333..22542)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKC0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89660.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
SCNpilot_expt_1000_bf_scaffold_386_20
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22631..23464)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S790_9HELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV98673.1}; TaxID=1249480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
SCNpilot_expt_1000_bf_scaffold_386_21
unknown

Not on your lists

comp(23646..23855)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_386_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23852..24151)
DNA (300bp) protein (100aa)
Helix-destabilizing protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUL0_COMTE
Helix-destabilizing protein {ECO:0000313|EMBL:EED67523.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_expt_1000_bf_scaffold_386_23
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24250..24564
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TPS5_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM32963.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_expt_1000_bf_scaffold_386_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24689..25912)
DNA (1224bp) protein (408aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Aspartokinase n=2 Tax=Acidovorax RepID=A1W6E5_ACISJ
SCNpilot_expt_1000_bf_scaffold_386_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26004..26963)
DNA (960bp) protein (320aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00054821};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
tRNA(ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
tRNA(Ile)-lysidine synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B2E9C
SCNpilot_expt_1000_bf_scaffold_386_26
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27015..28010)
DNA (996bp) protein (332aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (st
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6E3_ACISJ
SCNpilot_expt_1000_bf_scaffold_386_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28065..28706)
DNA (642bp) protein (214aa)
DNA-3-methyladenine glycosylase ii (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
HhH-GPD family protein id=12549688 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_386_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28752..30128)
DNA (1377bp) protein (459aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Cysteine--tRNA ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZX5_ALIDB rbh
SCNpilot_expt_1000_bf_scaffold_386_29
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30260..30865
DNA (606bp) protein (202aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q408_ACIAP
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADX46717.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_expt_1000_bf_scaffold_386_30
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30974..31555
DNA (582bp) protein (194aa)
peptidyl-prolyl isomerase (EC:5.2.1.8); K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q410_ACIAP
Displaying items 1-30 of 189 in total

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