name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_438_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(128..652)
|
Phosphoribosyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4D0_ACIDE
Phosphoribosyltransferase {ECO:0000313|EMBL:EER60689.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
phosphoribosyltransferase; K07101
|
|
SCNpilot_expt_1000_bf_scaffold_438_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(706..2091)
|
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00011}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Adenylosuccinate synthetase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=PURA_ACIET
|
|
SCNpilot_expt_1000_bf_scaffold_438_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2129..3277)
|
UPI0003A13687 related cluster n=1 Tax=unknown RepID=UPI0003A13687
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
histidyl-tRNA synthetase 2; K02502 ATP phosphoribosyltransferase regulatory subunit
|
|
SCNpilot_expt_1000_bf_scaffold_438_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3339..3524)
|
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP68_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91008.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K09937 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_438_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3537..4436)
|
hflc protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
Protein HflC n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFY4_ACIET
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_438_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4446..5510)
|
hflk protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
UPI0003D3D624 related cluster n=1 Tax=unknown RepID=UPI0003D3D624
Membrane protease subunits, stomatin/prohibitin homologs {ECO:0000313|EMBL:GAD24220.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
|
|
SCNpilot_expt_1000_bf_scaffold_438_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5901..7022)
|
GTP-binding proten HflX n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365BB13
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
GTP-binding proten HflX; K03665 GTP-binding protein HflX
|
|
SCNpilot_expt_1000_bf_scaffold_438_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7123..7371)
|
RNA-binding protein Hfq n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D6890
RNA chaperone Hfq; K03666 host factor-I protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_expt_1000_bf_scaffold_438_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7461..8804)
|
UPI0003A91DC1 related cluster n=1 Tax=unknown RepID=UPI0003A91DC1
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
engA; GTP-binding protein enga; K03977 GTP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_438_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8816..9955)
|
Outer membrane protein assembly factor BamB n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2Y6_ACIAP
outer membrane assembly lipoprotein YfgL
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
|
|
SCNpilot_expt_1000_bf_scaffold_438_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9952..10611)
|
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003807CED
Uncharacterized protein {ECO:0000313|EMBL:GAD24225.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_438_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10627..11916)
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Histidine--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXJ4_ALIDB
|
|
SCNpilot_expt_1000_bf_scaffold_438_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12000..13277)
|
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXJ5_ALIDB
|
|
SCNpilot_expt_1000_bf_scaffold_438_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13278..14213)
|
UPI0003A6C2AD related cluster n=1 Tax=unknown RepID=UPI0003A6C2AD
Uncharacterized protein {ECO:0000313|EMBL:GAD24228.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K15539 cytoskeleton protein RodZ
|
|
SCNpilot_expt_1000_bf_scaffold_438_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14206..15033)
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C2596
rbh
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:GAD24229.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
type IV pilus biogenesis/stability protein pilw; K02656 type IV pilus assembly protein PilF
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_438_16
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15063..16175)
|
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=5
Dual-specificity RNA methyltransferase RlmN n=2 Tax=Acidovorax RepID=RLMN_ACISJ
|
|
SCNpilot_expt_1000_bf_scaffold_438_17
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16231..16656)
|
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000255|HAMAP-Rule:MF_00451}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Nucleoside diphosphate kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=NDK_ACISJ
|
|
SCNpilot_expt_1000_bf_scaffold_438_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16734..17963)
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Pseudouridine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK0_ALIDB
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_438_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17956..18579)
|
Chromosome segregation and condensation protein, ScpB n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4B1_ACIDE
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_438_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18748..19737)
|
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Pseudouridine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEK2_ALIDK
|
|
SCNpilot_expt_1000_bf_scaffold_438_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19737..20585)
|
Peptidase M23B n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W569_ACISJ
peptidase M23B; K06194 lipoprotein NlpD
Peptidase M23B {ECO:0000313|EMBL:ABM41394.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
|
|
SCNpilot_expt_1000_bf_scaffold_438_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20626..21411)
|
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK4_ALIDB
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:GAO21948.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_438_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21408..22181)
|
surE; stationary phase survival protein SurE (EC:3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] id=12552302 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
stationary-phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_expt_1000_bf_scaffold_438_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22311..23291
|
alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
NADPH2:quinone reductase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X9B8_DELAC
NADPH2:quinone reductase {ECO:0000313|EMBL:EPD46740.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
|
|
SCNpilot_expt_1000_bf_scaffold_438_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23343..24866
|
diguanylate cyclase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BF437
Diguanylate cyclase {ECO:0000313|EMBL:GAD24239.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase; K13590 diguanylate cyclase
|
|
SCNpilot_expt_1000_bf_scaffold_438_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24990..25430)
|
Putative signal transduction protein with CBS domains n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MC55_ACIET
signal transduction protein with cbs domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACM33760.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_438_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25745..26350
|
gst; glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain-containing protein id=1279022 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
SCNpilot_expt_1000_bf_scaffold_438_28
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26424..27662)
|
Arabinose efflux permease family protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EKF9_9BURK
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJE52766.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
transporter
|
|
SCNpilot_expt_1000_bf_scaffold_438_29
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27683..28447)
|
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0K9N3_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE50310.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
IclR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_438_30
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28545..29384
|
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ED43_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJE50311.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
short chain dehydrogenase
|