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SCNpilot_expt_1000_bf_scaffold_977

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_977_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..211)
DNA (210bp) protein (70aa)
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. CF316 RepID=J1EL19_9BURK
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EJE52894.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCNpilot_expt_1000_bf_scaffold_977_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

318..812
DNA (495bp) protein (165aa)
LysR family transcriptional regulator id=12550944 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_977_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

754..1200
DNA (447bp) protein (149aa)
LysR family transcriptional regulator id=12550944 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_977_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1699..2466
DNA (768bp) protein (256aa)
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] id=12553224 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_977_5
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2496..3278
DNA (783bp) protein (261aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1310660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 983759.;"
2-ketocyclohexanecarboxyl-CoA hydrolase; K07536 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-] rbh
2-ketocyclohexanecarboxyl-CoA hydrolase n=1 Tax=Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 RepID=K6UJP2_ACIRA rbh
SCNpilot_expt_1000_bf_scaffold_977_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3298..4455
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase domain-containing protein; K04117 cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-] rbh
Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T923_ACIDE rbh
Cyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:EER59029.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_expt_1000_bf_scaffold_977_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4566..4763
DNA (198bp) protein (66aa)
cyclohexanecarboxylate-CoA ligase (EC:6.2.1.26); K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-] id=12553229 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cyclohexanecarboxylate-CoA ligase (EC:6.2.1.26); K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_977_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4736..6196
DNA (1461bp) protein (487aa)
cyclohexanecarboxylate-CoA ligase (EC:6.2.1.26); K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-] id=12553229 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cyclohexanecarboxylate-CoA ligase (EC:6.2.1.26); K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_977_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6397..7617
DNA (1221bp) protein (407aa)
Extracellular ligand-binding receptor n=2 Tax=Alicycliphilus denitrificans RepID=E8TX04_ALIDB rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:GAO25505.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
extracellular ligand-binding receptor rbh
SCNpilot_expt_1000_bf_scaffold_977_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7710..8603
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX03_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01906.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_977_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8617..10620
DNA (2004bp) protein (668aa)
acetoacetyl-CoA synthase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16] rbh
Acetoacetyl-CoA synthase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VP64_POLNA rbh
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:ABM37442.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_expt_1000_bf_scaffold_977_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10643..11695
DNA (1053bp) protein (351aa)
NADPH:quinone reductase (EC:1.6.5.5)
Alcohol dehydrogenase zinc-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX01_ALIDB
NADPH:quinone reductase {ECO:0000313|EMBL:GAO25502.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_1000_bf_scaffold_977_13
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11729..12631)
DNA (903bp) protein (301aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0KET2_9BURK
LysR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EJE52175.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCNpilot_expt_1000_bf_scaffold_977_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12837..14033
DNA (1197bp) protein (399aa)
glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] id=12551050 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_977_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14330..15373
DNA (1044bp) protein (348aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Adenosine deaminase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSB1_ALIDB
SCNpilot_expt_1000_bf_scaffold_977_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15392..16129
DNA (738bp) protein (246aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
phosphoserine phosphatase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371622C
Phosphoserine phosphatase serb {ECO:0000313|EMBL:GAD24877.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_977_17
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16126..16524
DNA (399bp) protein (133aa)
Putative fluoride ion transporter CrcB n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8S2_ACISJ
camphor resistance protein crcb; K06199 CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_1000_bf_scaffold_977_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16599..17474
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TU14_ALIDB
conserved hypothetical protein chp00730; K06966
Uncharacterized protein {ECO:0000313|EMBL:ADU99299.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_977_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17448..18620)
DNA (1173bp) protein (391aa)
cytochrome P450; K00517 [EC:1.14.-.-]
Cytochrome P450 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T231_ACIDE
Cytochrome P450 {ECO:0000313|EMBL:EER61444.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_expt_1000_bf_scaffold_977_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18830..19138
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DE6AF6
Cytochrome C class I {ECO:0000313|EMBL:EIK90616.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
class I cytochrome c
SCNpilot_expt_1000_bf_scaffold_977_21
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19150..20433
DNA (1284bp) protein (428aa)
flavocytochrome C sulfide dehydrogenase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031A1EF7 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_expt_1000_bf_scaffold_977_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20479..22086)
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003806103 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD24836.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K09760 DNA recombination protein RmuC rbh
SCNpilot_expt_1000_bf_scaffold_977_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22151..23116)
DNA (966bp) protein (322aa)
D-isomer specific 2-hydroxyacid dehydrogenase; K00090 gluconate 2-dehydrogenase [EC:1.1.1.215]
2-hydroxyacid dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002376A51
Glyoxylate reductase {ECO:0000313|EMBL:GAD24837.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_977_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23127..24548)
DNA (1422bp) protein (474aa)
Transporter, UIT6 family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8S7_ACISJ rbh
hypothetical protein rbh
Transporter, UIT6 family {ECO:0000313|EMBL:ABM42652.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_977_25
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24586..25785)
DNA (1200bp) protein (400aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11); K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00570}; Short=NAPRTase {ECO:0000255|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000255|HAMAP-Rule:MF_00570};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Nicotinate phosphoribosyltransferase n=2 Tax=Acidovorax RepID=PNCB_ACIET
SCNpilot_expt_1000_bf_scaffold_977_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25798..26172)
DNA (375bp) protein (125aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
thioesterase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368D935
Predicted thioesterase {ECO:0000313|EMBL:GAD24840.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_977_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26503..27045
DNA (543bp) protein (181aa)
granule protein PhaP n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003815173
Phasin family protein {ECO:0000313|EMBL:GAD24841.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
phasin family protein
SCNpilot_expt_1000_bf_scaffold_977_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27318..28076
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Alicycliphilus denitrificans RepID=E8TTB9_ALIDB rbh
short-chain dehydrogenase/reductase sdr rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU99275.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_977_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28120..29202)
DNA (1083bp) protein (361aa)
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HRQ7_9BURK
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:GAD21653.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
SCNpilot_expt_1000_bf_scaffold_977_30
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29313..30251)
DNA (939bp) protein (313aa)
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_01025};; Alpha-IPM synthase {ECO:0000255|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
2-isopropylmalate synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=LEU1_ACIET
Displaying items 1-30 of 77 in total

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