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SCNpilot_expt_1000_bf_scaffold_995

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_995_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16..3735)
DNA (3720bp) protein (1240aa)
Family 2 glycosyl transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT07_9BURK rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:EHL24501.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
family 2 glycosyl transferase rbh
SCNpilot_expt_1000_bf_scaffold_995_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3839..4588
DNA (750bp) protein (250aa)
Glycosyl transferase, family 2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1F2_ACIDE
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EER61710.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
glycosyl transferase family protein; K07011
SCNpilot_expt_1000_bf_scaffold_995_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4585..5685
DNA (1101bp) protein (367aa)
Glycosyl transferase, family 4 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3K9_ACISJ rbh
glycosyl transferase family protein rbh
Glycosyl transferase, family 4 {ECO:0000313|EMBL:ABM40834.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_995_4
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5791..6678
DNA (888bp) protein (296aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000255|HAMAP-Rule:MF_00082}; Short=AGK {ECO:0000255|HAMAP-Rule:MF_00082};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Acetylglutamate kinase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=ARGB_ACIAC
SCNpilot_expt_1000_bf_scaffold_995_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6776..7423
DNA (648bp) protein (216aa)
Regulatory protein TetR n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY43_ALIDB
regulatory protein tetr
Regulatory protein TetR {ECO:0000313|EMBL:ADU98442.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_995_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7459..9255
DNA (1797bp) protein (599aa)
acyl-CoA dehydrogenase domain-containing protein; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3L4_ACISJ
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABM40839.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_995_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9300..9728
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI000370745B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83052.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_995_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9750..10376
DNA (627bp) protein (209aa)
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XXY0_DELAC
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EPD44389.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_expt_1000_bf_scaffold_995_9
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10358..11218
DNA (861bp) protein (287aa)
NAD-binding 3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000376D3EC
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EXU80163.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
SCNpilot_expt_1000_bf_scaffold_995_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11239..12129
DNA (891bp) protein (297aa)
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCQ3_ACIET
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:ACM32053.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_1000_bf_scaffold_995_11
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12151..13350
DNA (1200bp) protein (400aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
Acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3L7_ACISJ
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ACM32054.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_1000_bf_scaffold_995_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13371..14264
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D42BE
Predicted alpha/beta hydrolase {ECO:0000313|EMBL:GAD20319.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hydrolase
SCNpilot_expt_1000_bf_scaffold_995_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14261..15094
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W3L9_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM40844.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_995_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15099..15884
DNA (786bp) protein (262aa)
enoyl-CoA hydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AC6FE rbh
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:GAD20321.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
enoyl-CoA hydratase/isomerase
SCNpilot_expt_1000_bf_scaffold_995_15
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16607..17266
DNA (660bp) protein (220aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0KCX7_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE48998.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_995_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17263..18168
DNA (906bp) protein (302aa)
2,4-dienoyl-CoA reductase n=1 Tax=Variovorax paradoxus RepID=UPI000361CAC1
Uncharacterized protein {ECO:0000313|EMBL:EJL72634.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
short-chain dehydrogenase/reductase SDR; K13774 citronellol/citronellal dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_995_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18165..19811
DNA (1647bp) protein (549aa)
Carboxyl transferase n=1 Tax=Comamonas testosteroni S44 RepID=D8DC22_COMTE
3-methylcrotonyl-CoA carboxylase subunit beta {ECO:0000313|EMBL:KGH08149.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
carboxyl transferase
SCNpilot_expt_1000_bf_scaffold_995_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19831..21009
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase; K11731 citronellyl-CoA dehydrogenase [EC:1.3.99.-]
Acyl-CoA dehydrogenase-like protein n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J5J2_COMT2
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGH03288.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_expt_1000_bf_scaffold_995_19
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21006..23072
DNA (2067bp) protein (689aa)
carbamoyl-phosphate synthase L chain; K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] rbh
Carbamoyl-phosphate synthase L chain n=1 Tax=Comamonas testosteroni S44 RepID=D8DC25_COMTE rbh
Carbamoyl-phosphate synthase L chain {ECO:0000313|EMBL:EFI59524.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
SCNpilot_expt_1000_bf_scaffold_995_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23069..24229
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375F68
putative acyl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_995_21
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24236..25015
DNA (780bp) protein (260aa)
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI000381F18A
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGH32298.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
enoyL-CoA hydratase/isomerase
SCNpilot_expt_1000_bf_scaffold_995_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25012..26874
DNA (1863bp) protein (621aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW05_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS16703.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_expt_1000_bf_scaffold_995_23
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26871..28457
DNA (1587bp) protein (529aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J5J9_COMT2 rbh
long-chain-fatty-acid--CoA ligase rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ACY32472.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
SCNpilot_expt_1000_bf_scaffold_995_24
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28476..29444)
DNA (969bp) protein (323aa)
Transcriptional regulator, AraC family n=2 Tax=Ralstonia pickettii RepID=B2UHY7_RALPJ rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACS65445.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_expt_1000_bf_scaffold_995_25
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29582..30241
DNA (660bp) protein (220aa)
Isochorismatase hydrolase n=2 Tax=Ralstonia pickettii RepID=B2UHY6_RALPJ rbh
isochorismatase hydrolase rbh
Isochorismatase {ECO:0000313|EMBL:KHK54792.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
SCNpilot_expt_1000_bf_scaffold_995_26
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30381..31826
DNA (1446bp) protein (482aa)
transporter id=12557872 bin=CNBR_ACIDO species=Pusillimonas noertemannii genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
transporter rbh
Putative transporter {ECO:0000313|EMBL:CBL46462.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_expt_1000_bf_scaffold_995_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31859..35902
DNA (4044bp) protein (1348aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWK3_ALIDB rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ADU99526.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_995_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35960..37150
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D372BD
Probable transporter {ECO:0000313|EMBL:CDM23083.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
transporter
SCNpilot_expt_1000_bf_scaffold_995_29
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37263..37811)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=Q0VRA2_ALCBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL16296.1}; TaxID=393595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689; / SK2).;"
Displaying 29 items

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