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SCNpilot_expt_1000_bf_scaffold_3823

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3823_1
unknown

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1121..1636
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3823_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1742..2230
DNA (489bp) protein (163aa)
XRE family transcriptional regulator id=12550162 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_3823_3
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2223..2927
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJ73_POLNA
Uncharacterized protein {ECO:0000313|EMBL:EWS63419.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3823_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2986..3183)
DNA (198bp) protein (66aa)
membrane protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000370847F
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:EER60086.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_expt_1000_bf_scaffold_3823_5
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3216..3425)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GD93_ALIDK
hypothetical protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCNpilot_expt_1000_bf_scaffold_3823_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3493..4629)
DNA (1137bp) protein (379aa)
fad-dependent pyridine nucleotide-disulfide oxidoreductase id=12551786 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
fad-dependent pyridine nucleotide-disulfide oxidoreductase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_3823_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4690..5976)
DNA (1287bp) protein (429aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GD95_ALIDK rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEB84854.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_3823_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6011..7447)
DNA (1437bp) protein (479aa)
Outer membrane efflux protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1P9_ALIDB
outer membrane efflux protein; K12340 outer membrane channel protein
Outer membrane efflux protein {ECO:0000313|EMBL:GAO23263.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_1000_bf_scaffold_3823_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7444..7944)
DNA (501bp) protein (167aa)
Acriflavin resistance protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q0_ALIDB
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ADV00039.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_3823_10
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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9410..9628
DNA (219bp) protein (73aa)
id=12551779 bin=BDI tax=BDI organism_group=Betaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_expt_1000_bf_scaffold_3823_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10658..11710)
DNA (1053bp) protein (351aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1Q1_ALIDB rbh
efflux transporter, rnd family, mfp subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV00040.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_3823_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11798..12139
DNA (342bp) protein (114aa)
Regulatory protein ArsR n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q2_ALIDB
regulatory protein arsr; K03892 ArsR family transcriptional regulator
Regulatory protein ArsR {ECO:0000313|EMBL:GAO23260.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying 12 items

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