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SCNpilot_expt_1000_bf_scaffold_9770

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9770_1

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3..119
DNA (117bp) protein (39aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
Elongation factor Tu (EF-Tu) (P-43) n=1 Tax=mine drainage metagenome RepID=E6PK11_9ZZZZ
Elongation factor Tu (EF-Tu) (P-43) {ECO:0000313|EMBL:CBH95262.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_expt_1000_bf_scaffold_9770_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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285..668
DNA (384bp) protein (128aa)
Protein translocase subunit SecE n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYR6_9BURK
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_9770_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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668..1255
DNA (588bp) protein (196aa)
Transcription termination/antitermination protein NusG n=1 Tax=Acidovorax sp. NO-1 RepID=H0C452_9BURK
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
NusG antitermination factor
SCNpilot_expt_1000_bf_scaffold_9770_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1382..1795
DNA (414bp) protein (138aa)
50S ribosomal protein L11 n=1 Tax=Comamonas sp. B-9 RepID=UPI000395637F
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_1000_bf_scaffold_9770_5
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1796..2491
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0U3_RAMTT
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_expt_1000_bf_scaffold_9770_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2723..3229
DNA (507bp) protein (169aa)
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=12551358 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
SCNpilot_expt_1000_bf_scaffold_9770_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3282..3662
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371E7A2
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
SCNpilot_expt_1000_bf_scaffold_9770_8
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3940..5229
DNA (1290bp) protein (430aa)
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8L7_ACIAP
Displaying 8 items

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