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SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

SCNPILOT_EXPT_1000_BF_Burkholderiales_66_2595
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 51-82 of 82 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_4268
Phylum: Proteobacteria (80%)
10 6878 bp 61.27 2350.32 89.85
SCNpilot_expt_1000_bf_scaffold_2098
Genus: Acidovorax (80%)
10 11656 bp 67.15 2544.55 93.66
SCNpilot_expt_1000_bf_scaffold_3769
Class: Betaproteobacteria (50%)
10 11539 bp 58.66 4186.19 95.70
SCNpilot_expt_1000_bf_scaffold_2062
Order: Burkholderiales (77.78%)
9 11529 bp 67.92 2597.75 94.87
SCNpilot_expt_1000_bf_scaffold_3232
Genus: Acidovorax (55.56%)
9 8344 bp 64.91 2410.95 94.45
SCNpilot_expt_1000_bf_scaffold_3894
Order: Burkholderiales (100%)
8 11811 bp 68.85 2843.09 91.31
SCNpilot_expt_1000_bf_scaffold_9770
Genus: Acidovorax (75%)
8 5229 bp 62.57 2194.83 83.71
SCNpilot_expt_1000_bf_scaffold_7010
Genus: Acidovorax (57.14%)
7 4821 bp 67.56 2688.14 90.91
SCNpilot_expt_1000_bf_scaffold_14269
Order: Burkholderiales (66.67%)
6 4423 bp 63.33 2253.11 85.26
SCNpilot_expt_1000_bf_scaffold_32031
Species: Alicycliphilus denitrificans (60%)
5 3014 bp 68.41 2237.31 73.66
SCNpilot_expt_1000_bf_scaffold_12168
Order: Burkholderiales (60%)
5 3162 bp 65.09 2158.68 87.76
SCNpilot_expt_1000_bf_scaffold_16506
Order: Burkholderiales (60%)
5 2463 bp 70.32 2454.73 100.00
SCNpilot_expt_1000_bf_scaffold_19390
Species: Pseudomonas sp. MRSN12121 (75%)
4 2152 bp 65.99 2097.35 89.22
SCNpilot_expt_1000_bf_scaffold_40523
Species: Ralstonia pickettii (75%)
4 2009 bp 69.49 2387.13 86.31
SCNpilot_expt_1000_bf_scaffold_8062
Genus: Alicycliphilus (50%)
4 4343 bp 67.35 2604.19 82.34
SCNpilot_expt_1000_bf_scaffold_19465
Genus: Pseudomonas (50%)
4 2146 bp 62.16 2402.73 81.64
SCNpilot_expt_1000_bf_scaffold_16469
Species: Alicycliphilus denitrificans (50%)
4 2467 bp 68.95 2588.06 85.73
SCNpilot_expt_1000_bf_scaffold_19288
Species: Ralstonia pickettii (50%)
4 2162 bp 64.85 2362.05 74.65
SCNpilot_expt_1000_bf_scaffold_46039
Order: Burkholderiales (50%)
4 1535 bp 66.32 2429.32 77.00
SCNpilot_expt_1000_bf_scaffold_12601
Species: Alicycliphilus sp. B1 (75%)
4 3299 bp 68.05 2873.67 97.21
SCNpilot_expt_1000_bf_scaffold_51510
Order: Burkholderiales (100%)
3 2032 bp 50.30 1930.61 71.90
SCNpilot_expt_1000_bf_scaffold_7475
Order: Burkholderiales (66.67%)
3 4605 bp 66.32 2618.19 93.49
SCNpilot_expt_1000_bf_scaffold_27766
Species: Alicycliphilus denitrificans (100%)
3 2247 bp 68.40 2271.25 95.99
SCNpilot_expt_1000_bf_scaffold_7517
Class: Alphaproteobacteria (66.67%)
3 4584 bp 59.25 2415.79 99.80
SCNpilot_expt_1000_bf_scaffold_9101
Species: Alicycliphilus denitrificans (50%)
2 3966 bp 52.47 2789.59 47.13
SCNpilot_expt_1000_bf_scaffold_22756
Species: Acidovorax sp. JS42 (50%)
2 2920 bp 63.97 2447.77 55.48
SCNpilot_expt_1000_bf_scaffold_30098
Species: Alicycliphilus denitrificans (100%)
2 1487 bp 65.57 2345.49 93.01
SCNpilot_expt_1000_bf_scaffold_39221
Species: Pandoraea apista (50%)
2 1190 bp 67.90 2084.24 94.03
SCNpilot_expt_1000_bf_scaffold_30453
Species: Ralstonia pickettii (50%)
2 1472 bp 70.58 2583.56 99.86
SCNpilot_expt_1000_bf_scaffold_59655
Species: Alicycliphilus sp. B1 (50%)
2 1202 bp 67.55 2201.96 100.08
SCNpilot_expt_1000_bf_scaffold_35344
Species: Pandoraea apista (50%)
2 1301 bp 62.72 2245.58 65.26
SCNpilot_expt_1000_bf_scaffold_26300
Species: Pseudomonas pseudoalcaligenes (100%)
1 1664 bp 61.66 4928.94 89.42
Displaying items 51-82 of 82 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.