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SCNpilot_expt_1000_bf_scaffold_645

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_645_1
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..230)
DNA (228bp) protein (76aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
GTP cyclohydrolase FolE2 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNG2_ACCPU
hypothetical protein; K09007 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_645_2
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(271..2163)
DNA (1893bp) protein (631aa)
1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNG1_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_645_3
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2197..3120)
DNA (924bp) protein (308aa)
polyprenyl synthetase; K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] rbh
Polyprenyl synthetase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNG0_ACCPU rbh
Polyprenyl synthetase {ECO:0000313|EMBL:ACV37346.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_645_4
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3117..3401)
DNA (285bp) protein (95aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
exodeoxyribonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNF9_ACCPU
SCNpilot_expt_1000_bf_scaffold_645_5
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3538..4638
DNA (1101bp) protein (367aa)
Putative iron-sulfur protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4R3_AZOSB rbh
alcE; putative iron-sulfur protein rbh
Putative iron-sulfur protein {ECO:0000313|EMBL:CAL93818.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
SCNpilot_expt_1000_bf_scaffold_645_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4717..5571
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BJ4_DECAR rbh
hypothetical protein; K15270 S-adenosylmethionine uptake transporter rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ47787.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_645_7
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5619..5978
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000360864F
Uncharacterized protein {ECO:0000313|EMBL:EXI76810.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_645_8
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5975..6814
DNA (840bp) protein (280aa)
Rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] rbh
Rhodanese domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNF7_ACCPU rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
SCNpilot_expt_1000_bf_scaffold_645_9
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6937..7152
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ31_SIDLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE11195.1}; Flags: Precursor;; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
SCNpilot_expt_1000_bf_scaffold_645_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7374..7964
DNA (591bp) protein (197aa)
Conserved hypothetical membrane protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K5J7_AZOSB
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_expt_1000_bf_scaffold_645_11
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7974..8843)
DNA (870bp) protein (290aa)
Putative hydrolase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WZ93_PSEDE rbh
putative hydrolase rbh
Tax=RBG_16_Gamma2_60_9_curated
SCNpilot_expt_1000_bf_scaffold_645_12
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8840..9496)
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family, putative n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNF6_ACCPU
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:EXI81783.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_645_13
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9500..11491)
DNA (1992bp) protein (664aa)
NADH:flavin oxidoreductase/NADH oxidase; K00219 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] rbh
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNF5_ACCPU rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACV37341.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_645_14
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11687..12412)
DNA (726bp) protein (242aa)
Transcriptional regulator n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4XN28_PSEDE
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KJJ96583.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_645_15
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12454..14187)
DNA (1734bp) protein (578aa)
ilvB; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase large subunit, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQE8_RHOCS
Thiamine pyrophosphate enzyme-like protein {ECO:0000313|EMBL:BAO30461.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
SCNpilot_expt_1000_bf_scaffold_645_16
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14204..15829)
DNA (1626bp) protein (542aa)
Putative FAD binding dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXI4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:BAO30460.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein; K07077
SCNpilot_expt_1000_bf_scaffold_645_17
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16065..18380)
DNA (2316bp) protein (772aa)
Putative uncharacterized protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5R8Y4_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK72951.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_645_18
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18772..20373)
DNA (1602bp) protein (534aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
Epoxyqueuosine reductase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVF3_ACCPU rbh
iron-sulfur cluster-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_645_19
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20463..21797
DNA (1335bp) protein (445aa)
N-acetylmuramoyl-L-alanine amidase AmiC {ECO:0000313|EMBL:KFB68445.1}; EC=3.5.1.28 {ECO:0000313|EMBL:KFB68445.1};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] rbh
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVF1_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_645_20
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22025..22594)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QVD4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EXI73961.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
TonB family protein
SCNpilot_expt_1000_bf_scaffold_645_21
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22722..27707)
DNA (4986bp) protein (1662aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036D9A5B
Type IV fimbrial biogenesis protein PilY1 {ECO:0000313|EMBL:GAO37782.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_645_22
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27741..28349)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000318B474
Type IV fimbrial biogenesis protein PilX {ECO:0000313|EMBL:AIY43267.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
type IV pilus assembly protein PilX
SCNpilot_expt_1000_bf_scaffold_645_23
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28340..29539)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D8B6F7
Uncharacterized protein {ECO:0000313|EMBL:BAO30696.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
type IV pilus assembly protein PilW; K02672 type IV pilus assembly protein PilW
SCNpilot_expt_1000_bf_scaffold_645_24
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29553..29954)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003102364
pilV; hypothetical protein; K02671 type IV pilus assembly protein PilV
Tax=RBG_16_Gallionellales_56_9_curated
SCNpilot_expt_1000_bf_scaffold_645_25
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29964..30497)
DNA (534bp) protein (178aa)
General secretion pathway protein H n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIF8_GALCS
general secretion pathway protein H; K08084 type IV fimbrial biogenesis protein FimT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_expt_1000_bf_scaffold_645_26
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30499..30927)
DNA (429bp) protein (143aa)
Type IV pilus biogenesis protein PilE n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AI82_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO37777.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
type IV pilus biogenesis protein PilE
SCNpilot_expt_1000_bf_scaffold_645_27
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31042..31956)
DNA (915bp) protein (305aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ISPH_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_expt_1000_bf_scaffold_645_28
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31964..32440)
DNA (477bp) protein (159aa)
FKBP-type peptidylprolyl isomerase; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036483BE
SCNpilot_expt_1000_bf_scaffold_645_29
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32437..33006)
DNA (570bp) protein (190aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLB1_AZOSU
sulfite oxidase-like oxidoreductase; K07147
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:AEV27825.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_645_30
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33009..33518)
DNA (510bp) protein (170aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
peptidase A8 n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036863C4
Displaying items 1-30 of 47 in total

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