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SCNpilot_expt_1000_bf_scaffold_875

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_875_1
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..382)
DNA (381bp) protein (127aa)
endolysin n=1 Tax=Oceanicola sp. S124 RepID=UPI000255A96A
Endolysin {ECO:0000313|EMBL:KHK65874.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;"
phage endolysin
SCNpilot_expt_1000_bf_scaffold_875_2
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

644..1723
DNA (1080bp) protein (360aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTB7_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_875_3
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1729..3249
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKN5_AZOSU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV27774.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_875_4
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3267..4175
DNA (909bp) protein (303aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKN6_AZOSU rbh
4-hydroxybenzoate polyprenyltransferase rbh
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AEV27775.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_875_5
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4295..5107
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PVG1_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL25309.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_1000_bf_scaffold_875_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5191..5463
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035F5F0F
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCNpilot_expt_1000_bf_scaffold_875_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5696..6271
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DU6_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ46985.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_875_8
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6290..6853
DNA (564bp) protein (188aa)
Nicotinamidase-like amidase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6H8J3_9DELT
isochorismatase hydrolase family protein
Tax=CG_Desulfovib_01
SCNpilot_expt_1000_bf_scaffold_875_9
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6897..7475)
DNA (579bp) protein (193aa)
ATP/cobalamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] rbh
ATP/cobalamin adenosyltransferase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMI6_ACCPU rbh
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:ACV34013.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_875_10
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7524..8372
DNA (849bp) protein (283aa)
hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22] rbh
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Hydroxypyruvate isomerase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMI5_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_875_11
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8377..8862)
DNA (486bp) protein (162aa)
Hemerythrin-like metal-binding protein n=1 Tax=Thauera sp. 63 RepID=N6Y6Z5_9RHOO
McHr {ECO:0000313|EMBL:EXI75820.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hemerythrin-like metal-binding protein; K07216 hemerythrin
SCNpilot_expt_1000_bf_scaffold_875_12
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9036..11366
DNA (2331bp) protein (777aa)
FAD linked oxidase domain-containing protein; K00104 glycolate oxidase [EC:1.1.3.15] rbh
Putative FAD-linked oxidoreductase {ECO:0000313|EMBL:EXI78728.1}; EC=1.-.-.- {ECO:0000313|EMBL:EXI78728.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
FAD linked oxidase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMW1_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_875_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11366..12478
DNA (1113bp) protein (371aa)
FAD linked oxidase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMW2_ACCPU rbh
FAD linked oxidase domain-containing protein; K11472 glycolate oxidase FAD binding subunit rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_expt_1000_bf_scaffold_875_14
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12491..13789
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMW3_ACCPU rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit rbh
SCNpilot_expt_1000_bf_scaffold_875_15
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14064..14381
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMW5_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI78724.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_875_16
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14407..15147
DNA (741bp) protein (247aa)
Serine/threonine phosphatase stp {ECO:0000313|EMBL:EXI87606.1}; EC=3.1.3.16 {ECO:0000313|EMBL:EXI87606.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
Protein serine/threonine phosphatase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMW6_ACCPU rbh
protein serine/threonine phosphatase rbh
SCNpilot_expt_1000_bf_scaffold_875_17
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15335..15988)
DNA (654bp) protein (218aa)
Transcriptional regulator, TetR family n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QNS7_METS6
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACT51910.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
SCNpilot_expt_1000_bf_scaffold_875_18
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16184..17368
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036BC31F rbh
RND family efflux transporter MFP subunit; K03585 membrane fusion protein rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABK97965.1}; Flags: Precursor;; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
SCNpilot_expt_1000_bf_scaffold_875_19
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17380..20520
DNA (3141bp) protein (1047aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QNS5_METS6 rbh
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ACT51908.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
SCNpilot_expt_1000_bf_scaffold_875_20
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20522..21916
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000361157D rbh
NodT family RND efflux system outer membrane lipoprotein rbh
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACT51907.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
SCNpilot_expt_1000_bf_scaffold_875_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22063..23550)
DNA (1488bp) protein (496aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMW7_ACCPU rbh
DEAD/DEAH box helicase domain-containing protein rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACV35334.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_875_22
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23855..24892
DNA (1038bp) protein (346aa)
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:EXI69423.1}; EC=1.1.1.- {ECO:0000313|EMBL:EXI69423.1};; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Aldo/keto reductase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H05_DECAR rbh
aldo/keto reductase rbh
SCNpilot_expt_1000_bf_scaffold_875_23
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24902..25174
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4C7_AZOSB
Uncharacterized protein {ECO:0000313|EMBL:EXI73389.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_875_24
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25333..25539
DNA (207bp) protein (69aa)
cold shock-like protein id=12496848 bin=THIO_MID species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Cold-shock protein {ECO:0000313|EMBL:EPZ14971.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
cold shock-like protein
SCNpilot_expt_1000_bf_scaffold_875_25
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25699..25953
DNA (255bp) protein (85aa)
Translation initiation factor IF-1 1 n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=IF11_AROAE
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_1000_bf_scaffold_875_26
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26816..27253)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMW9_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:KFB76449.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_875_27
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27454..28707
DNA (1254bp) protein (418aa)
Extracellular solute-binding protein family 1 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMX4_ACCPU rbh
sn-glycerol-3-phosphate-binding periplasmic protein UgpB {ECO:0000313|EMBL:EXI80844.1}; Flags: Precursor;; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
family 1 extracellular solute-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_875_28
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28712..29482
DNA (771bp) protein (257aa)
ugpQ; cytoplasmic glycerophosphodiester phosphodiesterase (EC:3.1.4.46); K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] rbh
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:ACV35342.1}; EC=3.1.4.46 {ECO:0000313|EMBL:ACV35342.1};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Glycerophosphodiester phosphodiesterase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMX5_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_875_29
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


29620..32235
DNA (2616bp) protein (872aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
alanine--tRNA ligase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] rbh
Alanine--tRNA ligase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK15_AZOSU rbh
SCNpilot_expt_1000_bf_scaffold_875_30
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32367..34409)
DNA (2043bp) protein (681aa)
Cytochrome c n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJ39_AZOSU rbh
Cytochrome C {ECO:0000313|EMBL:KHA76058.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
cytochrome c rbh
Displaying items 1-30 of 53 in total

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