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SCNpilot_expt_1000_bf_scaffold_884

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_884_1
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1121)
DNA (1119bp) protein (373aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KFB76328.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFB76328.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUS4_ACCPU
peptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_884_2
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1118..2542)
DNA (1425bp) protein (475aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUS5_ACCPU rbh
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACV36320.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_884_3
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2539..3519)
DNA (981bp) protein (327aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUS6_ACCPU rbh
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:EXI77751.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_884_4
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3551..5734)
DNA (2184bp) protein (728aa)
Extracellular solute-binding protein family 5 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUS7_ACCPU rbh
family 5 extracellular solute-binding protein rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACV36322.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_884_5
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5901..6701
DNA (801bp) protein (267aa)
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUS8_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_884_6
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6827..8734)
DNA (1908bp) protein (636aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] rbh
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPX8_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_884_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8985..12332)
DNA (3348bp) protein (1116aa)
Transcriptional activator domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETX02302.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SC5F8.05c; LuxR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_884_8
unknown

Not on your lists

comp(12526..14010)
DNA (1485bp) protein (495aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_884_9
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14219..16378
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALgr3 RepID=UPI00035DF457
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
SCNpilot_expt_1000_bf_scaffold_884_10
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16891..17631
DNA (741bp) protein (247aa)
prokaryotic N- methylation site n=1 Tax=Geovibrio thiophilus RepID=UPI0003B6BC9C
prepilin-type N-terminal cleavage/methylation domain protein
Tax=GWA2_Deltaproteobacteria_54_12_curated
SCNpilot_expt_1000_bf_scaffold_884_11
unknown

Not on your lists

17758..19227
DNA (1470bp) protein (490aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_884_12
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

19227..20849
DNA (1623bp) protein (541aa)
secretion system protein E n=1 Tax=Hippea alviniae RepID=UPI0003B609DF rbh
Type II secretion system protein E {ECO:0000313|EMBL:KFN38507.1}; TaxID=1537917 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
type II secretion system protein E; K02652 type IV pilus assembly protein PilB rbh
SCNpilot_expt_1000_bf_scaffold_884_13
Desulfurella acetivorans, Desulfurella, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20853..22076
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B3E63B
Pilus assembly protein PilC {ECO:0000313|EMBL:AHF96616.1}; TaxID=694431 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Desulfurella.;" source="Desulfurella acetivorans A63.;"
type II secretion system protein; K02653 type IV pilus assembly protein PilC
SCNpilot_expt_1000_bf_scaffold_884_14
unknown

Not on your lists

22124..22792
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_884_15
unknown

Not on your lists

22806..23237
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_884_16
unknown

Not on your lists

23263..23865
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_884_17
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

23883..25460
DNA (1578bp) protein (526aa)
Type II and III secretion system protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IRY0_9BACT
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_expt_1000_bf_scaffold_884_18
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

25489..26340
DNA (852bp) protein (284aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE6D
peptidoglycan-binding domain 1 protein; K02450 general secretion pathway protein A
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_expt_1000_bf_scaffold_884_19
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26193..27200)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WS54_RHOS5
Uncharacterized protein {ECO:0000313|EMBL:ABP70218.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
SCNpilot_expt_1000_bf_scaffold_884_20
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

27646..27990
DNA (345bp) protein (115aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R5J8_ISOPI
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADV61747.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCNpilot_expt_1000_bf_scaffold_884_21
Gluconobacter frateurii, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28001..28567
DNA (567bp) protein (189aa)
UPI0003D2B244 related cluster n=1 Tax=unknown RepID=UPI0003D2B244
Predicted regulatory protein {ECO:0000313|EMBL:GAD11714.1}; TaxID=1307834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter frateurii NBRC 103465.;"
trbN; conjugal transfer protein TrbN
SCNpilot_expt_1000_bf_scaffold_884_22
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28580..30550
DNA (1971bp) protein (657aa)
Extracellular repeat-containing protein, HAF family n=1 Tax=Thauera sp. 27 RepID=N6YKL3_9RHOO rbh
Extracellular repeat-containing protein, HAF family {ECO:0000313|EMBL:ENO82733.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
extracellular repeat-containing protein, HAF family
SCNpilot_expt_1000_bf_scaffold_884_23
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31041..31313)
DNA (273bp) protein (91aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJU0_AZOSU
nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:AEV26564.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_884_24
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31475..33889)
DNA (2415bp) protein (805aa)
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Lon protease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJT9_AZOSU rbh
SCNpilot_expt_1000_bf_scaffold_884_25
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33993..35264)
DNA (1272bp) protein (424aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJT8_AZOSU rbh
endopeptidase Clp ATP-binding regulatory subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_884_26
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35321..35962)
DNA (642bp) protein (214aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPX5_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_884_27
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35995..36915)
DNA (921bp) protein (307aa)
Trigger factor n=1 Tax=uncultured bacterium RepID=K2FGS9_9BACT rbh
tig; trigger factor; K03545 trigger factor rbh
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_884_28
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37522..38352
DNA (831bp) protein (277aa)
Dehydrosqualene synthase {ECO:0000313|EMBL:EXI67933.1}; EC=2.5.1.96 {ECO:0000313|EMBL:EXI67933.1};; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Squalene synthase HpnC n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIE9_ACCPU rbh
squalene synthase HpnC rbh
SCNpilot_expt_1000_bf_scaffold_884_29
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38361..39194
DNA (834bp) protein (278aa)
squalene synthase HpnD; K02291 phytoene synthase [EC:2.5.1.32] rbh
Squalene synthase HpnD n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIF0_ACCPU rbh
Squalene synthase HpnD {ECO:0000313|EMBL:ACV36524.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_884_30
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39161..40525
DNA (1365bp) protein (455aa)
15-cis-phytoene desaturase {ECO:0000313|EMBL:EXI72967.1}; EC=1.3.5.5 {ECO:0000313|EMBL:EXI72967.1};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
Squalene-associated FAD-dependent desaturase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIF1_ACCPU rbh
squalene-associated FAD-dependent desaturase rbh
Displaying items 1-30 of 81 in total

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