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SCNpilot_expt_1000_bf_scaffold_954

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_954_1
unknown

Not on your lists

comp(2..100)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_954_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173..970)
DNA (798bp) protein (266aa)
type 11 methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003748A29 rbh
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAD23972.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
type 11 methyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_954_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(967..1770)
DNA (804bp) protein (268aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
iron ABC transporter ATP-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363A416 rbh
Iron-chelate-transporting ATPase {ECO:0000313|EMBL:GAD23971.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_954_4
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1767..2417)
DNA (651bp) protein (217aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S048_9BURK
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EFV94197.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
ABC transporter permease; K02015 iron complex transport system permease protein
SCNpilot_expt_1000_bf_scaffold_954_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2830..3231)
DNA (402bp) protein (134aa)
Periplasmic binding protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D0Z5_COMTE
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGH31808.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_expt_1000_bf_scaffold_954_6
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3856..4401)
DNA (546bp) protein (182aa)
Molybdenum ABC transporter ATP-binding protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XZU3_9RHOO
Molybdenum ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENO84785.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
molybdenum ABC transporter ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_954_7
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4431..5231)
DNA (801bp) protein (267aa)
Molybdopterin binding oxidoreductase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PCR1_9BURK
Molybdopterin binding oxidoreductase {ECO:0000313|EMBL:ELX09460.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
class I cytochrome c
SCNpilot_expt_1000_bf_scaffold_954_8
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(5285..6292)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037B17B0
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF26780.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_expt_1000_bf_scaffold_954_9
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6332..7387)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037B17B0
Putative TonB-dependent receptor {ECO:0000313|EMBL:ENO87342.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
TonB-dependent receptor
SCNpilot_expt_1000_bf_scaffold_954_10
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7661..8242
DNA (582bp) protein (194aa)
NifQ family protein n=1 Tax=Ralstonia sp. PBA RepID=I9BT02_9RALS
NifQ family protein {ECO:0000313|EMBL:EIZ03033.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
NifQ family protein; K15790 nitrogen fixation protein NifQ
SCNpilot_expt_1000_bf_scaffold_954_11
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8499..9299
DNA (801bp) protein (267aa)
modA; molybdate-binding periplasmic protein; K02020 molybdate transport system substrate-binding protein id=12495993 bin=THIO_MID species=Massilia niastensis genus=Massilia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
modA; molybdenum ABC transporter, periplasmic binding protein; K02020 molybdate transport system substrate-binding protein rbh
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_expt_1000_bf_scaffold_954_12
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9302..9991
DNA (690bp) protein (230aa)
molybdate ABC transporter permease; K02018 molybdate transport system permease protein id=12495992 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Molybdenum transport protein ModB {ECO:0000313|EMBL:BAP79056.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MT-1.;"
modB1; Mo transporter membrane protein, ModB1; K02018 molybdate transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_954_13
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9988..11055
DNA (1068bp) protein (356aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Molybdenum import ATP-binding protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q0F7_9RHOO rbh
modC; molybdenum import ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_954_14
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11079..11453)
DNA (375bp) protein (125aa)
Molybdenum-binding transcriptional regulator n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T4A7_JANMA
modE2; molybdenum-binding transcriptional regulator; K02019 molybdate transport system regulatory protein
Molybdenum-binding transcriptional regulator {ECO:0000313|EMBL:ABR90353.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
SCNpilot_expt_1000_bf_scaffold_954_15
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11464..12177)
DNA (714bp) protein (238aa)
Succinate-semialdehyde dehydrogenase [NADP(+)] GabD {ECO:0000313|EMBL:KFB72828.1}; EC=1.2.1.79 {ECO:0000313|EMBL:KFB72828.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
Aldehyde dehydrogenase n=1 Tax=Accumulibacter phosphatis (strain UW-1) PF4_ACCPU">RepID=C7RPF4_ACCPU
aldehyde dehydrogenase
SCNpilot_expt_1000_bf_scaffold_954_16
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12174..13601)
DNA (1428bp) protein (476aa)
Putative iron-sulfur binding protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2P1_AROAE rbh
iron-sulfur binding protein rbh
Putative iron-sulfur binding protein {ECO:0000313|EMBL:CAI08423.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_1000_bf_scaffold_954_17
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13601..14365)
DNA (765bp) protein (255aa)
Predicted Fe-S oxidoreductase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2P2_AROAE rbh
hypothetical protein rbh
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_expt_1000_bf_scaffold_954_18
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14494..15270
DNA (777bp) protein (259aa)
Transcriptional regulator, IclR family n=1 Tax=Accumulibacter phosphatis (strain UW-1) PF5_ACCPU">RepID=C7RPF5_ACCPU rbh
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACV37452.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_954_19
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15335..16270)
DNA (936bp) protein (312aa)
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:KFB65891.1}; EC=3.4.21.- {ECO:0000313|EMBL:KFB65891.1};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] rbh
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNI3_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_954_20
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16394..17527)
DNA (1134bp) protein (378aa)
Patatin n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNI2_ACCPU rbh
Patatin {ECO:0000313|EMBL:KFB72146.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
Patatin; K07001 NTE family protein rbh
SCNpilot_expt_1000_bf_scaffold_954_21
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17644..19926)
DNA (2283bp) protein (761aa)
malic enzyme (EC:1.1.1.39); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] rbh
Phosphate acetyl/butaryl transferase:Malic enzyme, N-terminal:Malic enzyme, NAD-binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA9_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_954_22
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20290..22131
DNA (1842bp) protein (614aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Azoarcus sp. KH32C RepID=H0PRY6_9RHOO rbh
pckA; phosphoenolpyruvate carboxykinase rbh
SCNpilot_expt_1000_bf_scaffold_954_23
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22197..23357
DNA (1161bp) protein (387aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KFB72239.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KFB72239.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
Aminotransferase class I and II n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNH9_ACCPU rbh
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_954_24
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23484..24347)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM40_AZOSU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV24556.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_954_25
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24930..25490)
DNA (561bp) protein (187aa)
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD {ECO:0000313|EMBL:EXI73625.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EXI73625.1};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNH8_ACCPU
N-acetyl-anhydromuranmyl-L-alanine amidase; K03806 AmpD protein
SCNpilot_expt_1000_bf_scaffold_954_26
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25487..26857)
DNA (1371bp) protein (457aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNH7_ACCPU rbh
two component sigma-54 specific Fis family transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACV34113.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_954_27
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27048..28433)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] rbh
Multi-sensor signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNH6_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_954_28
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29020..29988)
DNA (969bp) protein (323aa)
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:KFB72489.1}; EC=2.5.1.90 {ECO:0000313|EMBL:KFB72489.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] rbh
Polyprenyl synthetase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMT3_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_954_29
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


30169..30480
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM67_AZOSU
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_954_30
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


30499..30759
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM68_AZOSU
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Displaying items 1-30 of 32 in total

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