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SCNpilot_expt_1000_bf_scaffold_2059

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2059_1
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..501
DNA (501bp) protein (167aa)
Putative poly-gamma-glutamate biosynthesis enzyme n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GT3_DECAR
Capsule biosynthesis protein CapA {ECO:0000313|EMBL:EXI81673.1}; Flags: Precursor;; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
poly-gamma-glutamate biosynthesis enzyme; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein)
SCNpilot_expt_1000_bf_scaffold_2059_2
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

513..872
DNA (360bp) protein (120aa)
phosphomannose protein (EC:5.3.1.8)
Conserved hypothetical phosphomannose protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K413_AZOSB
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_expt_1000_bf_scaffold_2059_3
unknown

Not on your lists

1077..1226
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2059_4
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1168..1929
DNA (762bp) protein (254aa)
methyltransferase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000360BA96 rbh
hypothetical protein
Tax=GWC1_Azotobacter_66_9_curated
SCNpilot_expt_1000_bf_scaffold_2059_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2112..3113
DNA (1002bp) protein (334aa)
Catalase-related peroxidase {ECO:0000256|PIRNR:PIRNR000296}; EC=1.11.1.- {ECO:0000256|PIRNR:PIRNR000296};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
catalase (EC:1.11.1.6); K03781 catalase [EC:1.11.1.6] rbh
Catalase-related peroxidase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNN9_SIDLE rbh
SCNpilot_expt_1000_bf_scaffold_2059_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3165..3698)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0R4_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_1000_bf_scaffold_2059_7
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3698..5155)
DNA (1458bp) protein (486aa)
Putative periplasmic serine endoprotease DegP-like {ECO:0000313|EMBL:EXI69744.1}; EC=3.4.21.107 {ECO:0000313|EMBL:EXI69744.1};; Flags: Precursor;; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
peptidase S1C, Do; K01362 [EC:3.4.21.-] rbh
Peptidase S1C, Do n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ET5_DECAR rbh
SCNpilot_expt_1000_bf_scaffold_2059_8
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5210..6622)
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Two-component system histidine kinase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q228_9RHOO rbh
qseC; two-component system histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_2059_9
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6619..7281)
DNA (663bp) protein (221aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRM3_ACCPU rbh
Transcriptional regulatory protein QseB {ECO:0000313|EMBL:EXI90773.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator rbh
SCNpilot_expt_1000_bf_scaffold_2059_10
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7670..8368)
DNA (699bp) protein (233aa)
ubiquinone biosynthesis O-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] rbh
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000366775C rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
SCNpilot_expt_1000_bf_scaffold_2059_11
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8410..9114)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036E5205 rbh
Outer membrane protein II {ECO:0000313|EMBL:KFB75401.1}; Flags: Precursor;; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
OmpA/MotB domain-containing protein; K03286 OmpA-OmpF porin, OOP family rbh
SCNpilot_expt_1000_bf_scaffold_2059_12
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9205..10593)
DNA (1389bp) protein (463aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQR9_ACCPU rbh
N-ethylammeline chlorohydrolase rbh
SCNpilot_expt_1000_bf_scaffold_2059_13
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10598..11287)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036C96DA rbh
outer membrane protein/peptidoglycan-associated (lipo)protein
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:AEV26311.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_2059_14
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11545..14172
DNA (2628bp) protein (876aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] rbh
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
DNA gyrase subunit A n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035D2D3E rbh
SCNpilot_expt_1000_bf_scaffold_2059_15
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14176..15273
DNA (1098bp) protein (366aa)
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035E86FF rbh
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_2059_16
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16422..17303
DNA (882bp) protein (294aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] rbh
prephenate dehydrogenase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003612778 rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:AEV26315.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_2059_17
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17321..19267
DNA (1947bp) protein (649aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase (EC:2.5.1.19 2.7.4.14); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037E6C49 rbh
SCNpilot_expt_1000_bf_scaffold_2059_18
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19420..19914
DNA (495bp) protein (165aa)
30S ribosomal protein S1 n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037A6246
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
SCNpilot_expt_1000_bf_scaffold_2059_19
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19859..20290)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AF1E3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA50251.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_expt_1000_bf_scaffold_2059_20
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20322..21014
DNA (693bp) protein (231aa)
30S ribosomal protein S1 n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037A6246
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
SCNpilot_expt_1000_bf_scaffold_2059_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21024..21308
DNA (285bp) protein (95aa)
transcriptional regulator n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037BAFEC
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta
Integration host factor subunit beta {ECO:0000255|HAMAP-Rule:MF_00381}; Short=IHF-beta {ECO:0000255|HAMAP-Rule:MF_00381};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_2059_22
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21398..21688
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037807A5
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:EXI89265.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
SCNpilot_expt_1000_bf_scaffold_2059_23
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21701..22870
DNA (1170bp) protein (390aa)
N-acetylglucosaminyl transferase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036E2F86 rbh
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2059_24
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22880..24205
DNA (1326bp) protein (442aa)
nucleotide sugar dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] rbh
Nucleotide sugar dehydrogenase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHW7_AZOSU rbh
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:AEV26321.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_2059_25
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24205..25137
DNA (933bp) protein (311aa)
sugar kinase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037319E6 rbh
Bifunctional protein HldE {ECO:0000313|EMBL:KFB72036.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
bifunctional protein RfaE rbh
SCNpilot_expt_1000_bf_scaffold_2059_26
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25147..25842
DNA (696bp) protein (232aa)
ADP-L-glycero-D-manno-heptose-6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055236};; ADP-L-glycero-beta-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHX3_AZOSU
SCNpilot_expt_1000_bf_scaffold_2059_27
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25800..26147
DNA (348bp) protein (116aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055236};; ADP-L-glycero-beta-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
ADP-glyceromanno-heptose 6-epimerase precursor (EC:5.1.3.20); K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003784B3B
SCNpilot_expt_1000_bf_scaffold_2059_28
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26134..27039
DNA (906bp) protein (302aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
cysM; cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47] rbh
cysteine synthase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035E2103 rbh
SCNpilot_expt_1000_bf_scaffold_2059_29
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27042..27827
DNA (786bp) protein (262aa)
3''''-5'''' exonuclease n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036ABC54 rbh
propable PolB; K07501 hypothetical protein rbh
Propable PolB {ECO:0000313|EMBL:ACV36172.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_2059_30
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28116..30032
DNA (1917bp) protein (639aa)
threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
Threonine--tRNA ligase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=SYT_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_60_92
Displaying items 1-30 of 64 in total

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