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SCNpilot_expt_1000_bf_scaffold_1259

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1259_1
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..466
DNA (465bp) protein (155aa)
60 kDa chaperonin n=1 Tax=Thauera sp. 63 RepID=N6X410_9RHOO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL
SCNpilot_expt_1000_bf_scaffold_1259_2
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

806..1486
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKG3_ACCPU rbh
Transcriptional regulatory protein tctD {ECO:0000313|EMBL:EXI78564.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator rbh
SCNpilot_expt_1000_bf_scaffold_1259_3
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1455..2957
DNA (1503bp) protein (501aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] rbh
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKT3_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_1259_4
unknown

Not on your lists

comp(3148..3336)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1259_5

Not on your lists

3614..5149
DNA (1536bp) protein (512aa)
Bifunctional protein {ECO:0000313|EMBL:CBI11883.1}; EC=2.7.7.22 {ECO:0000313|EMBL:CBI11883.1};; EC=5.3.1.8 {ECO:0000313|EMBL:CBI11883.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.13); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] rbh
Bifunctional protein n=1 Tax=mine drainage metagenome RepID=E6QXA9_9ZZZZ rbh
SCNpilot_expt_1000_bf_scaffold_1259_6
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5146..5967
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CKP6_9BURK rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
hypothetical protein; K09690 lipopolysaccharide transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1259_7
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5957..7384
DNA (1428bp) protein (476aa)
ABC transporter-like protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CKP7_9BURK rbh
ABC transporter-like protein {ECO:0000313|EMBL:EIM96465.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1259_8
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7418..8143
DNA (726bp) protein (242aa)
Sulfotransferase domain superfamily n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR79_9SYNE
Sulfotransferase domain superfamily {ECO:0000313|EMBL:EDX85405.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
sulfotransferase
SCNpilot_expt_1000_bf_scaffold_1259_9
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8144..8449
DNA (306bp) protein (102aa)
Methyltransferase domain family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR80_9SYNE
Methyltransferase domain family {ECO:0000313|EMBL:EDX85885.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
type 11 methyltransferase
SCNpilot_expt_1000_bf_scaffold_1259_10
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8507..8989
DNA (483bp) protein (161aa)
Methyltransferase domain family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR80_9SYNE
Methyltransferase domain family {ECO:0000313|EMBL:EDX85885.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
type 11 methyltransferase
SCNpilot_expt_1000_bf_scaffold_1259_11
unknown

Not on your lists

comp(9295..9642)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1259_12
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10427..12064
DNA (1638bp) protein (546aa)
Glycosyltransferase n=1 Tax=Burkholderia terrae BS001 RepID=I5CKQ0_9BURK rbh
Putative Methyltransferase {ECO:0000313|EMBL:CEG62329.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legionella micdadei).;"
glycosyltransferase
SCNpilot_expt_1000_bf_scaffold_1259_13
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12138..13106
DNA (969bp) protein (323aa)
Methyltransferase type 12 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDJ0_SPHWW
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ABQ70356.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_1259_14
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13183..14052
DNA (870bp) protein (290aa)
Glycosyltransferase n=1 Tax=Burkholderia terrae BS001 RepID=I5CKQ1_9BURK rbh
Glycosyltransferase {ECO:0000313|EMBL:EIM96469.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
glycosyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_1259_15
Candidatus Endoriftia persephone, Candidatus Endoriftia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14120..15118
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABG77120.1}; EC=4.2.1.46 {ECO:0000313|EMBL:ABG77120.1};; TaxID=394104 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts; Candidatus Endoriftia.;" source="Candidatus Endoriftia persephone str. Hot96_1+Hot96_2.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) rbh
NAD-dependent dehydratase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035C94EA rbh
SCNpilot_expt_1000_bf_scaffold_1259_16
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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15132..15842
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000363D669 rbh
Nucleotidyl transferase {ECO:0000313|EMBL:EGV20014.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
nucleotidyltransferase
SCNpilot_expt_1000_bf_scaffold_1259_17
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15839..16705
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037D46FA
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EGV20013.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
NAD-dependent epimerase/dehydratase
SCNpilot_expt_1000_bf_scaffold_1259_18
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16692..17651
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003667784 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EGV20012.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
glycosyl transferase family protein rbh
SCNpilot_expt_1000_bf_scaffold_1259_19
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17632..18318
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RZI9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFN41935.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
S-adenosyl-L-methionine (SAM)-dependent methyltransferase
SCNpilot_expt_1000_bf_scaffold_1259_20

Not on your lists

18315..18701
DNA (387bp) protein (129aa)
GtrA family protein n=1 Tax=uncultured bacterium RepID=K2DHT5_9BACT
GtrA family protein {ECO:0000313|EMBL:EKD97597.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GtrA family protein
SCNpilot_expt_1000_bf_scaffold_1259_21
Helicobacter fennelliae, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18723..20732
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Helicobacter fennelliae MRY12-0050 RepID=T1D0B0_9HELI
Uncharacterized protein {ECO:0000313|EMBL:GAD18651.1}; TaxID=1325130 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter fennelliae MRY12-0050.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1259_22
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20735..21904
DNA (1170bp) protein (390aa)
Glycosyltransferase n=1 Tax=Burkholderia terrae BS001 RepID=I5CKP4_9BURK rbh
Glycosyltransferase {ECO:0000313|EMBL:EIM96462.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
glycosyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_1259_23
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21901..22923
DNA (1023bp) protein (341aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Burkholderia terrae BS001 RepID=I5CKP3_9BURK rbh
GDP-mannose 4,6-dehydratase {ECO:0000313|EMBL:EIM96461.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
SCNpilot_expt_1000_bf_scaffold_1259_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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22957..24039
DNA (1083bp) protein (361aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003744ED4
SCNpilot_expt_1000_bf_scaffold_1259_25
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24204..24383
DNA (180bp) protein (60aa)
Transposase family protein n=2 Tax=Aeromonas RepID=R4VVM8_AERHY
transposase family protein
Transposase {ECO:0000313|EMBL:KDV01535.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
SCNpilot_expt_1000_bf_scaffold_1259_26
unknown

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24849..25004
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1259_27
Yersinia mollaretii, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25158..25793
DNA (636bp) protein (212aa)
Glycosyl transferase, family 2 n=1 Tax=Yersinia mollaretii ATCC 43969 RepID=C4S7I2_YERMO
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EEQ12382.1}; TaxID=349967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia mollaretii ATCC 43969.;"
exoU; UDP-hexose transferase
SCNpilot_expt_1000_bf_scaffold_1259_28
Yersinia mollaretii, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25812..26930
DNA (1119bp) protein (373aa)
group 1 glycosyl transferase; K12995 rhamnosyltransferase [EC:2.4.1.-] rbh
Glycosyl transferase WbpZ n=1 Tax=Yersinia mollaretii ATCC 43969 RepID=C4S7I1_YERMO rbh
Glycosyl transferase WbpZ {ECO:0000313|EMBL:EEQ12381.1}; TaxID=349967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia mollaretii ATCC 43969.;"
SCNpilot_expt_1000_bf_scaffold_1259_29
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26950..28860)
DNA (1911bp) protein (637aa)
sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase (EC:2.7.1.25 2.7.7.4); K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] rbh
Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase {ECO:0000313|EMBL:ABO56200.1}; EC=2.7.1.25 {ECO:0000313|EMBL:ABO56200.1};; EC=2.7.7.4 {ECO:0000313|EMBL:ABO56200.1};; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JIU7_BURVG rbh
SCNpilot_expt_1000_bf_scaffold_1259_30
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28860..30326)
DNA (1467bp) protein (489aa)
nodP; sulfate adenylyltransferase subunit 2; K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] rbh
sulfate adenylyltransferase subunit 2 n=1 Tax=Pseudomonas fluorescens RepID=UPI0002FFF232 rbh
Sulfate adenylyltransferase {ECO:0000313|EMBL:KFJ92569.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
Displaying items 1-30 of 34 in total

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