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SCNpilot_expt_1000_bf_scaffold_1416

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1416_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..877
DNA (876bp) protein (292aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47B48_DECAR
SCNpilot_expt_1000_bf_scaffold_1416_2
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(971..1600)
DNA (630bp) protein (210aa)
PEBP family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKE4_ACCPU rbh
Putative kinase inhibitor protein {ECO:0000313|EMBL:KFB77168.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
PEBP family protein; K06910 rbh
SCNpilot_expt_1000_bf_scaffold_1416_3
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1620..3158)
DNA (1539bp) protein (513aa)
Integral membrane protein MviN n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKE3_ACCPU rbh
integral membrane protein MviN; K03980 virulence factor rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1416_4
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3346..3612
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRJ2_ACCPU
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
SCNpilot_expt_1000_bf_scaffold_1416_5

Not on your lists

comp(3680..3988)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FI72_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE17544.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1416_6
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4416..5588
DNA (1173bp) protein (391aa)
acetylornithine aminotransferase; K00818 acetylornithine aminotransferase [EC:2.6.1.11] rbh
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Acetylornithine aminotransferase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUW3_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_1416_7
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5942..6505
DNA (564bp) protein (188aa)
Ornithine carbamoyltransferase, catabolic n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJB2_AZOSU
ornithine carbamoyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
SCNpilot_expt_1000_bf_scaffold_1416_8
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6524..6844
DNA (321bp) protein (107aa)
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJB1_AZOSU
Tax=GWA2_Gallionellales_55_18_curated
SCNpilot_expt_1000_bf_scaffold_1416_9
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7057..7776
DNA (720bp) protein (240aa)
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase {ECO:0000313|EMBL:KFB71980.1}; EC=6.3.4.5 {ECO:0000313|EMBL:KFB71980.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
argininosuccinate synthase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000380E131
SCNpilot_expt_1000_bf_scaffold_1416_10
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7789..7998
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUW0_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI65437.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1416_11
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8000..8320
DNA (321bp) protein (107aa)
UPF0345 protein Daro_3029 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Y3029_DECAR
hypothetical protein; K09913 hypothetical protein
Tax=CG_Hydro_01
SCNpilot_expt_1000_bf_scaffold_1416_12
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8333..8827
DNA (495bp) protein (165aa)
UPF0234 protein Dsui_3245 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJA8_AZOSU
hypothetical protein; K09767 hypothetical protein
UPF0234 protein Dsui_3245 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_1416_13
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8910..9671)
DNA (762bp) protein (254aa)
GMP synthase family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJA7_AZOSU rbh
GMP synthase rbh
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_1416_14
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9673..10329
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNV3_ACCPU
Clan AA aspartic protease {ECO:0000313|EMBL:KFB72744.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein; K06985 aspartyl protease family protein
SCNpilot_expt_1000_bf_scaffold_1416_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10340..10597
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BM6_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47755.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1416_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10545..11204
DNA (660bp) protein (220aa)
NUDIX hydrolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BM7_DECAR rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:AAZ47754.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1416_17
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11332..12279
DNA (948bp) protein (316aa)
cobalamin biosynthesis protein cobD/CbiB; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] rbh
Cobalamin biosynthesis protein CobD n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJA3_AZOSU rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_1416_18
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12304..13485
DNA (1182bp) protein (394aa)
beta-ketothiolase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:ABD69995.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ABD69995.1};; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Acetyl-CoA C-acetyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W58_RHOFD rbh
SCNpilot_expt_1000_bf_scaffold_1416_19
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13632..14513
DNA (882bp) protein (294aa)
Metal dependent phosphohydrolase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SGW9_GALCS
metal dependent phosphohydrolase
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_expt_1000_bf_scaffold_1416_20
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14670..16097
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLR1_ACCPU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV33955.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1416_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16173..17129
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLR2_ACCPU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV33956.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1416_22
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17151..18470)
DNA (1320bp) protein (440aa)
Diguanylate cyclase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RS34_ACCPU rbh
diguanylate cyclase rbh
Diguanylate cyclase {ECO:0000313|EMBL:ACV35857.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1416_23
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18522..19265)
DNA (744bp) protein (248aa)
Extracellular solute-binding protein family 3 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RS33_ACCPU
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACV35856.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1416_24
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19423..20157
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLR3_ACCPU rbh
hypothetical protein; K07395 putative proteasome-type protease rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV33957.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1416_25
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20182..22095)
DNA (1914bp) protein (638aa)
Sigma54 specific transcriptional regulator with GAF sensor, Fis family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122U0_POLSJ rbh
sigma-54 dependent trancsriptional regulator rbh
Sigma54 specific transcriptional regulator with GAF sensor, Fis family {ECO:0000313|EMBL:ABE46452.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_expt_1000_bf_scaffold_1416_26
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22456..23886
DNA (1431bp) protein (477aa)
Acetaldehyde dehydrogenase 2 {ECO:0000313|EMBL:EXI75802.1}; EC=1.2.1.3 {ECO:0000313|EMBL:EXI75802.1};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
aldehyde dehydrogenase (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZQ79_9PROT
SCNpilot_expt_1000_bf_scaffold_1416_27
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23976..24356
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD98_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EXI75801.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein; K09959 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1416_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24542..25411
DNA (870bp) protein (290aa)
Pirin domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUM6_9BURK rbh
Pirin domain-containing protein {ECO:0000313|EMBL:EIK92916.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
pirin-related protein; K06911
SCNpilot_expt_1000_bf_scaffold_1416_29
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25552..25902
DNA (351bp) protein (117aa)
Putative Fe-S oxidoreductase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGX3_AZOSU
Fe-S oxidoreductase {ECO:0000313|EMBL:GAO35817.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
putative Fe-S oxidoreductase
SCNpilot_expt_1000_bf_scaffold_1416_30
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26040..26240
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IZ3_DECAR
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
Displaying items 1-30 of 62 in total

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