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SCNpilot_expt_1000_bf_scaffold_1426

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1426_1
unknown

Not on your lists

3..83
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1426_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93..2393
DNA (2301bp) protein (767aa)
ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DS7_DECAR rbh
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AAZ47004.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1426_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3181..3813
DNA (633bp) protein (211aa)
Flagellar basal body rod protein FlgB n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DS2_DECAR
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1426_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3975..4253
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DS1_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47010.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1426_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4571..5899
DNA (1329bp) protein (443aa)
Metal-dependent phosphohydrolase, HD subdomain n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DS0_DECAR rbh
metal-dependent phosphohydrolase rbh
Metal-dependent phosphohydrolase, HD subdomain {ECO:0000313|EMBL:AAZ47011.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1426_6
unknown

Not on your lists

5896..6141
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1426_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6179..6430
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DR8_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47013.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1426_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6427..7077
DNA (651bp) protein (217aa)
Protein-S-isoprenylcysteine methyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DR7_DECAR rbh
protein-S-isoprenylcysteine methyltransferase rbh
Protein-S-isoprenylcysteine methyltransferase {ECO:0000313|EMBL:AAZ47014.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1426_9
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7256..7540)
DNA (285bp) protein (95aa)
Copper resistance protein K n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNT4_AZOSU
Copper resistance protein K
Copper resistance protein K {ECO:0000313|EMBL:AEV26978.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_1426_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7648..8040)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DR1_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47020.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1426_11
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8216..9490
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XPW2_DELAC
Type II restriction enzyme {ECO:0000313|EMBL:KDP84615.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1426_12
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9826..10902
DNA (1077bp) protein (359aa)
Plasmid replication region DNA-binding N-term protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNT2_AZOSU rbh
Plasmid replication region DNA-binding N-term protein rbh
Plasmid replication region DNA-binding N-term protein {ECO:0000313|EMBL:AEV26976.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_1426_13
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11487..12878
DNA (1392bp) protein (464aa)
Excinuclease cho {ECO:0000313|EMBL:KFB73638.1}; EC=3.1.25.- {ECO:0000313|EMBL:KFB73638.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
DNA polymerase III, epsilon subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR73_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_1426_14
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12870..13523)
DNA (654bp) protein (218aa)
Ankyrin n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR74_ACCPU
Ankyrin repeat protein {ECO:0000313|EMBL:EXI89726.1}; Flags: Precursor;; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
ankyrin; K06867
SCNpilot_expt_1000_bf_scaffold_1426_15
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13639..14277)
DNA (639bp) protein (213aa)
Putative deoxyribonuclease YcfH {ECO:0000313|EMBL:KFB70849.1}; EC=3.1.21.- {ECO:0000313|EMBL:KFB70849.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
Hydrolase, TatD family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR75_ACCPU
SCNpilot_expt_1000_bf_scaffold_1426_16
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14286..14672)
DNA (387bp) protein (129aa)
Tfp pilus assembly protein PilZ n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPA2_AZOSU
Uncharacterized protein {ECO:0000313|EMBL:EXI71074.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
Tfp pilus assembly protein PilZ; K02676 type IV pilus assembly protein PilZ
SCNpilot_expt_1000_bf_scaffold_1426_17
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14680..15714)
DNA (1035bp) protein (345aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] rbh
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:ACV35758.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACV35758.1};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
DNA polymerase III, delta prime subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR77_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_1426_18
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15714..16328)
DNA (615bp) protein (205aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] rbh
Thymidylate kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR78_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_1426_19
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16325..17326)
DNA (1002bp) protein (334aa)
Aminodeoxychorismate lyase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR79_ACCPU rbh
Putative aminodeoxychorismate lyase {ECO:0000313|EMBL:EXI89731.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
aminodeoxychorismate lyase; K07082 UPF0755 protein rbh
SCNpilot_expt_1000_bf_scaffold_1426_20
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17545..18561
DNA (1017bp) protein (339aa)
Folate-binding protein YgfZ n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR80_ACCPU rbh
tRNA-modifying protein YgfZ {ECO:0000313|EMBL:KFB69249.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
folate-binding protein YgfZ; K06980 rbh
SCNpilot_expt_1000_bf_scaffold_1426_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18609..19415
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR81_ACCPU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV35762.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1426_22
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19436..19918)
DNA (483bp) protein (161aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DZ1_DECAR
ErfK/YbiS/YcfS/YnhG
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_1426_23
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19921..20379)
DNA (459bp) protein (153aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
CMP/dCMP deaminase zinc-binding n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR83_ACCPU
zinc-binding CMP/dCMP deaminase
SCNpilot_expt_1000_bf_scaffold_1426_24
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20369..20812)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPB3_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV27014.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_1426_25
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20946..22943)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMU1_ACCPU rbh
Putative phosphatase {ECO:0000313|EMBL:EXI78168.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein; K07093 rbh
SCNpilot_expt_1000_bf_scaffold_1426_26
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23065..24747)
DNA (1683bp) protein (561aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDI04165.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CDI04165.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RX8_RHOFD
SCNpilot_expt_1000_bf_scaffold_1426_27
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25115..25915
DNA (801bp) protein (267aa)
Putative zinc transport system ATP-binding protein AdcC {ECO:0000313|EMBL:EXI78163.1}; EC=3.6.3.- {ECO:0000313|EMBL:EXI78163.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
ABC transporter related n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMT9_ACCPU rbh
ABC transporter; K02074 zinc/manganese transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1426_28
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25912..26823
DNA (912bp) protein (304aa)
ABC-3 protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMT8_ACCPU rbh
Manganese transport system membrane protein MntB {ECO:0000313|EMBL:KFB72180.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
ABC transporter; K02075 zinc/manganese transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1426_29
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26840..27769
DNA (930bp) protein (310aa)
Periplasmic solute binding protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMT7_ACCPU rbh
periplasmic solute-binding protein; K02077 zinc/manganese transport system substrate-binding protein rbh
Periplasmic solute binding protein {ECO:0000313|EMBL:ACV35304.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1426_30
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27787..28368
DNA (582bp) protein (194aa)
OmpA/MotB domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL52_ACCPU
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ACV33874.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Displaying items 1-30 of 40 in total

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