ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1470

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1470_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2137)
DNA (2136bp) protein (712aa)
PAS protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I46_DECAR rbh
PAS; K03406 methyl-accepting chemotaxis protein rbh
PAS protein {ECO:0000313|EMBL:AAZ45485.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1470_2
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2192..4528)
DNA (2337bp) protein (779aa)
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I47_DECAR rbh
histidine kinase, HAMP region: chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein rbh
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_1470_3
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4553..5056)
DNA (504bp) protein (168aa)
CheW-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I48_DECAR
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_1470_4
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5174..7495)
DNA (2322bp) protein (774aa)
chemotaxis protein histidine kinase-like protein; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Chemotaxis protein histidine kinase-like protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QG20_AZOSU
SCNpilot_expt_1000_bf_scaffold_1470_5
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7541..7906)
DNA (366bp) protein (122aa)
Response regulator receiver n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I50_DECAR
response regulator receiver; K03413 two-component system, chemotaxis family, response regulator CheY
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_expt_1000_bf_scaffold_1470_6
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7924..9147)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003807FAB rbh
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AEV26091.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_1470_7
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9197..10156)
DNA (960bp) protein (320aa)
flagellar motor protein MotB n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000371AFCF rbh
Chemotaxis protein MotB {ECO:0000313|EMBL:EXI92653.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
motB; flagellar motor protein MotB; K02557 chemotaxis protein MotB rbh
SCNpilot_expt_1000_bf_scaffold_1470_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10187..11044)
DNA (858bp) protein (286aa)
flagellar motor protein MotA n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000367A0CB rbh
chemotaxis MotA protein; K02556 chemotaxis protein MotA rbh
Chemotaxis MotA protein {ECO:0000313|EMBL:ACV35813.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_1470_9
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11172..13130)
DNA (1959bp) protein (653aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000376F1C7 rbh
mmoQ; response regulator rbh
Probable response regulator {ECO:0000313|EMBL:CAL94061.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
SCNpilot_expt_1000_bf_scaffold_1470_10
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13323..13865
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000365F916 rbh
NADH pyrophosphatase {ECO:0000313|EMBL:EXI73947.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
Nudix hydrolase-like protein
SCNpilot_expt_1000_bf_scaffold_1470_11
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13923..14699)
DNA (777bp) protein (259aa)
TonB family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRZ3_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI68744.1}; Flags: Precursor;; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
TonB family protein; K03832 periplasmic protein TonB
SCNpilot_expt_1000_bf_scaffold_1470_12
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14881..15492
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000371FD7C rbh
putative nuclease
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_expt_1000_bf_scaffold_1470_13
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15627..16163)
DNA (537bp) protein (179aa)
Response regulator n=1 Tax=Thauera sp. 27 RepID=N6XN02_9RHOO
Response regulator {ECO:0000313|EMBL:ENO83076.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCNpilot_expt_1000_bf_scaffold_1470_14
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16169..17497)
DNA (1329bp) protein (443aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Thauera sp. 28 RepID=N6ZJY5_9RHOO rbh
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:ENO83077.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
response regulator receiver modulated metal dependent phosphohydrolase rbh
SCNpilot_expt_1000_bf_scaffold_1470_15
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17494..17823)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A2E98
two-component sensor
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_expt_1000_bf_scaffold_1470_16
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17820..18410)
DNA (591bp) protein (197aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A2E98
histidine kinase
Displaying 16 items

View Taxonomy