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SCNpilot_expt_1000_bf_scaffold_1545

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1545_1
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3..398
DNA (396bp) protein (132aa)
lipopolysaccharide biosynthesis protein n=1 Tax=Aliivibrio logei RepID=UPI000300F0E6
CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; K12452 CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase
Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_expt_1000_bf_scaffold_1545_2
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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399..1439
DNA (1041bp) protein (347aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKE65279.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AKE65279.1};; TaxID=1641812 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa NIES-2549.;"
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] rbh
NAD-dependent epimerase/dehydratase n=1 Tax=Microcystis aeruginosa PCC 9809 RepID=I4I4I9_MICAE rbh
SCNpilot_expt_1000_bf_scaffold_1545_3
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

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1605..2072
DNA (468bp) protein (156aa)
HAD superfamily hydrolase (EC:2.7.7.13); K15669 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI0002E21DC3
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
SCNpilot_expt_1000_bf_scaffold_1545_4
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2030..2275
DNA (246bp) protein (82aa)
HAD superfamily hydrolase (EC:2.7.7.13); K15669 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI0002E21DC3
HAD family hydrolase {ECO:0000313|EMBL:KFE57849.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
SCNpilot_expt_1000_bf_scaffold_1545_5
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

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2263..3627
DNA (1365bp) protein (455aa)
Putative sugar kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] rbh
sugar kinase n=1 Tax=Pseudomonas mendocina RepID=UPI00036A2EB6 rbh
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
SCNpilot_expt_1000_bf_scaffold_1545_6
Pseudomonas sp. SHC52, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3624..5528
DNA (1905bp) protein (635aa)
N-acetylneuraminate synthase {ECO:0000313|EMBL:CDF92474.1}; EC=2.5.1.56 {ECO:0000313|EMBL:CDF92474.1};; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. SHC52.;"
N-acetyl neuramic acid synthetase NeuB (EC:2.5.1.56 2.5.1.57); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] rbh
acetylneuraminic acid synthetase n=1 Tax=Pseudomonas putida RepID=UPI0002DACFEA rbh
SCNpilot_expt_1000_bf_scaffold_1545_7
Pseudomonas sp. SHC52, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5559..7340
DNA (1782bp) protein (594aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:CDF92475.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CDF92475.1};; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. SHC52.;"
Thiamine pyrophosphate binding domain-containing protein (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI00030D7D12 rbh
SCNpilot_expt_1000_bf_scaffold_1545_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7517..8623
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00037A496E
FkbM family methyltransferase
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_1000_bf_scaffold_1545_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8675..9739
DNA (1065bp) protein (355aa)
Putative coenzyme PQQ synthesis protein E n=1 Tax=Selenomonas sp. oral taxon 137 str. F0430 RepID=E4LHK1_9FIRM rbh
radical SAM protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_1000_bf_scaffold_1545_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9736..10779
DNA (1044bp) protein (348aa)
Radical SAM domain protein n=1 Tax=Selenomonas sp. oral taxon 137 str. F0430 RepID=E4LHK2_9FIRM rbh
Radical SAM domain protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_1000_bf_scaffold_1545_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10883..12028
DNA (1146bp) protein (382aa)
Putative methyltransferase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SZF9_9GAMM rbh
methyltransferase rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_1000_bf_scaffold_1545_12
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12154..14766
DNA (2613bp) protein (871aa)
Uncharacterized protein (Fragment) n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1AT41_9NEIS rbh
Uncharacterized protein {ECO:0000313|EMBL:ERE20035.1}; Flags: Fragment;; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
glycosyl transferase family protein
SCNpilot_expt_1000_bf_scaffold_1545_13
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14766..15584
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D2A1_9BURK
Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_expt_1000_bf_scaffold_1545_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15590..16348)
DNA (759bp) protein (253aa)
TPR repeat n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HZ0_DECAR
hypothetical protein
TPR repeat {ECO:0000313|EMBL:AAZ45541.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_1545_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16398..16949)
DNA (552bp) protein (184aa)
TPR repeat n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HZ0_DECAR
hypothetical protein
TPR repeat {ECO:0000313|EMBL:AAZ45541.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Displaying 15 items

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