name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1725_1
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
159..2252
|
iron-sulfur binding protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000379B3B4
rbh
iron-sulfur binding protein
rbh
Putative iron-sulfur binding protein {ECO:0000313|EMBL:CAI07778.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_2
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2249..2887
|
Cytoplasmic chaperone TorD family protein n=2 Tax=Thauera RepID=C4KCB3_THASP
cytoplasmic chaperone TorD family protein
Cytoplasmic chaperone TorD family protein {ECO:0000313|EMBL:ACR02304.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_3
unknown
|
Not on your lists |
2913..3146
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1725_4
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3163..6051
|
Probable formate dehydrogenase alpha subunit {ECO:0000313|EMBL:CAL96098.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CAL96098.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
fdhA2; formate dehydrogenase subunit alpha (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
rbh
Probable formate dehydrogenase alpha subunit n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KB92_AZOSB
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1725_5
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6080..6736
|
4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Thauera RepID=C4KCB0_THASP
rbh
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K00124 formate dehydrogenase, beta subunit
rbh
4Fe-4S dicluster domain protein {ECO:0000313|EMBL:KIN89234.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_6
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6733..6954
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037AF4BA
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
|
|
SCNpilot_expt_1000_bf_scaffold_1725_7
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6964..8046
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036CA446
rbh
fdhC; putative formate dehydrogenase, gamma subunit
rbh
Putative formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:BAL22425.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_8
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8043..8381
|
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036ACD37
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
|
|
SCNpilot_expt_1000_bf_scaffold_1725_9
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8533..9315
|
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:EXI86355.1}; EC=3.2.2.21 {ECO:0000313|EMBL:EXI86355.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
HhH-GPD family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN26_ACCPU
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1725_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9171..9647)
|
Ferritin-like protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PU53_9RHOO
Ferritin-like protein {ECO:0000313|EMBL:BAP58094.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ferritin-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_1725_11
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9657..9977)
|
Ferredoxin-like protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI76_AZOSU
ferredoxin-like protein
Ferredoxin-like protein {ECO:0000313|EMBL:AEV27479.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9974..11053)
|
FixC oxidoreductase subunit with FAD/NAD(P)-binding domain n=1 Tax=mine drainage metagenome RepID=E6QRR4_9ZZZZ
Protein fixC {ECO:0000313|EMBL:GAO37809.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
fixC_etfD; electron-transferring-flavoprotein dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_1725_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11129..11290)
|
protein fixC n=1 Tax=Thiobacillus thioparus RepID=UPI00037D00AB
fixC_etfD; electron-transferring-flavoprotein dehydrogenase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1725_14 |
Not on your lists |
comp(11287..12444)
|
Protein fixB n=1 Tax=mine drainage metagenome RepID=E6QHC8_9ZZZZ
rbh
Protein fixB {ECO:0000313|EMBL:CBI06642.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fixB; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1725_15
uncultured bacterium DX-1A-14, Bacteria
|
Not on your lists |
comp(12441..13310)
|
FixA n=1 Tax=uncultured bacterium DX-1A-14 RepID=M1L785_9BACT
rbh
FixA {ECO:0000313|EMBL:AGF34081.1}; TaxID=1292053 species="Bacteria; environmental samples.;" source="uncultured bacterium DX-1A-14.;"
fixA; flavoprotein subunit subunit beta; K03521 electron transfer flavoprotein beta subunit
|
|
SCNpilot_expt_1000_bf_scaffold_1725_16
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13483..14451
|
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ACCA_DECAR
rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
|
|
SCNpilot_expt_1000_bf_scaffold_1725_17
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14420..15844
|
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN28_ACCPU
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1725_18
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15887..19018)
|
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003800B73
rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1725_19
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19103..19720)
|
Two component transcriptional regulator, LuxR family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN31_ACCPU
rbh
Transcriptional regulatory protein FixJ {ECO:0000313|EMBL:EXI68277.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
two component LuxR family transcriptional regulator; K11712 two-component system, LuxR family, response regulator DctR
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1725_20
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19717..21711)
|
multi-sensor signal transduction histidine kinase; K11711 two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN32_ACCPU
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1725_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21866..23206
|
C4-dicarboxylate transport protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=DCTA_DECAR
rbh
C4-dicarboxylate transporter DctA; K11103 aerobic C4-dicarboxylate transport protein
rbh
C4-dicarboxylate transport protein {ECO:0000255|HAMAP-Rule:MF_01300}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_22
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23334..24338
|
Probable c4-dicarboxylate-binding periplasmic protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K3Y1_AZOSB
rbh
dctP2; c4-dicarboxylate-binding periplasmic protein; K11688 C4-dicarboxylate-binding protein DctP
rbh
Probable c4-dicarboxylate-binding periplasmic protein {ECO:0000313|EMBL:CAL93536.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_23
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24413..25117
|
Tripartite ATP-independent periplasmic transporter DctQ component n=2 Tax=Thauera RepID=C4KCP3_THASP
rbh
tripartite ATP-independent periplasmic transporter DctQ component; K11689 C4-dicarboxylate transporter, DctQ subunit
rbh
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ENO83579.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_24
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25114..26397
|
TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Thauera RepID=C4KCP2_THASP
rbh
TRAP dicarboxylate transporter subunit DctM; K11690 C4-dicarboxylate transporter, DctM subunit
rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:KIN90243.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_25
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26601..27029
|
nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Nucleoside diphosphate kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI75_AZOSU
|
|
SCNpilot_expt_1000_bf_scaffold_1725_26
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27055..28149
|
2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
rbh
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Flags:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI74_AZOSU
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1725_27
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28146..28949
|
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN38_ACCPU
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:KFB72959.1}; Flags: Precursor;; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
type IV pilus biogenesis/stability protein PilW; K02656 type IV pilus assembly protein PilF
|
|
SCNpilot_expt_1000_bf_scaffold_1725_28
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28946..29971
|
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI72_AZOSU
hypothetical protein; K15539 cytoskeleton protein RodZ
Uncharacterized protein {ECO:0000313|EMBL:AEV27475.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1725_29
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29968..31221
|
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN40_ACCPU
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1725_30
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31218..32513
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
Histidine--tRNA ligase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN41_ACCPU
rbh
|