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SCNpilot_expt_1000_bf_scaffold_3034

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3034_1
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2..733
DNA (732bp) protein (244aa)
isocitrate dehydrogenase, NADP-dependent, monomeric type; K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase, NADP-dependent, monomeric type n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJF7_AZOSU
Isocitrate dehydrogenase, NADP-dependent, monomeric type {ECO:0000313|EMBL:AEV27626.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_3034_2
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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941..2167
DNA (1227bp) protein (409aa)
isocitrate dehydrogenase, NADP-dependent, prokaryotic type; K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJF8_AZOSU rbh
SCNpilot_expt_1000_bf_scaffold_3034_3
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2235..2642)
DNA (408bp) protein (136aa)
Hemerythrin-like metal-binding domain-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGA9_AZOSU
hemerythrin-like metal-binding domain-containing protein
Hemerythrin-like metal-binding domain-containing protein {ECO:0000313|EMBL:AEV27227.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_3034_4
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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2862..3254
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036F0885
Uncharacterized protein {ECO:0000313|EMBL:EXI76824.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3034_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3550..3987
DNA (438bp) protein (146aa)
Transcription elongation factor n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLJ6_AZOSU
transcription elongation factor; K06140 regulator of nucleoside diphosphate kinase
Transcription elongation factor {ECO:0000313|EMBL:AEV24525.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_3034_6
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4022..4960)
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Thauera RepID=C4ZLX4_THASP rbh
hypothetical protein rbh
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_3034_7
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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5286..6719
DNA (1434bp) protein (478aa)
Putative two-component system sensor protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PVU7_9RHOO
putative two-component system sensor protein
Putative two-component system sensor protein {ECO:0000313|EMBL:BAL26399.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_1000_bf_scaffold_3034_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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6736..7419
DNA (684bp) protein (228aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M1_RHOFD
two component LuxR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_expt_1000_bf_scaffold_3034_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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7713..8090
DNA (378bp) protein (126aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M1_RHOFD
two component LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_1000_bf_scaffold_3034_10
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8548..8847
DNA (300bp) protein (100aa)
Flp/Fap pilin component n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T1K0_9BURK
Flp/Fap pilin component {ECO:0000313|EMBL:EDT42570.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria MEX-5.;"
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA
SCNpilot_expt_1000_bf_scaffold_3034_11
unknown

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8861..8941
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 11 items

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