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SCNpilot_expt_1000_bf_scaffold_4693

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4693_1
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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228..749
DNA (522bp) protein (174aa)
Molecular chaperone (Small heat shock protein) n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMD2_AZOSU
molecular chaperone; K13993 HSP20 family protein
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:AEV25710.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_4693_2
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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746..1633
DNA (888bp) protein (296aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] rbh
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Acetylglutamate kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMD1_AZOSU rbh
SCNpilot_expt_1000_bf_scaffold_4693_3
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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1633..2256
DNA (624bp) protein (208aa)
HAD-superfamily hydrolase subfamily IA, variant 3:Pyrimidine 5-nucleotidase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IE6_DECAR
Phosphoglycolate phosphatase {ECO:0000313|EMBL:KFB72929.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
HAD family pyrimidine 5-nucleotidase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_expt_1000_bf_scaffold_4693_4
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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2519..3640
DNA (1122bp) protein (374aa)
Acyltransferase 3 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK66_ACCPU rbh
acyltransferase 3 rbh
Acyltransferase 3 {ECO:0000313|EMBL:ACV33657.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_4693_5
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3630..4640)
DNA (1011bp) protein (337aa)
Porphobilinogen synthase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] rbh
Delta-aminolevulinic acid dehydratase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK67_ACCPU rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_expt_1000_bf_scaffold_4693_6
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4800..5180)
DNA (381bp) protein (127aa)
Probable GTP-binding protein EngB n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK68_ACCPU
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein
SCNpilot_expt_1000_bf_scaffold_4693_7
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5183..5521)
DNA (339bp) protein (113aa)
Probable GTP-binding protein EngB n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMC7_AZOSU
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
ribosome biogenesis GTP-binding protein YsxC/EngB; K03978 GTP-binding protein
SCNpilot_expt_1000_bf_scaffold_4693_8
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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5633..5950
DNA (318bp) protein (106aa)
Cytochrome c class I n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK69_ACCPU
Cytochrome c4 {ECO:0000313|EMBL:KFB73937.1}; Flags: Precursor;; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
cytochrome c class I
SCNpilot_expt_1000_bf_scaffold_4693_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6091..6249
DNA (159bp) protein (53aa)
Cytochrome c, class I n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IF0_DECAR
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:AAZ45381.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_4693_10
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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6376..6807
DNA (432bp) protein (144aa)
CBS domain containing membrane protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK70_ACCPU
CBS domain containing membrane protein
CBS domain containing membrane protein {ECO:0000313|EMBL:ACV33661.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_4693_11
R_Proteobacteria_53_8, Proteobacteria, Bacteria

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6934..7305
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IQ4_DECAR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
SCNpilot_expt_1000_bf_scaffold_4693_12
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7330..7830
DNA (501bp) protein (167aa)
ECF subfamily RNA polymerase, sigma-24 subunit n=1 Tax=Ralstonia sp. PBA RepID=I9KXD1_9RALS
ECF subfamily RNA polymerase, sigma-24 subunit {ECO:0000313|EMBL:EIZ04990.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
rpoE8; ECF subfamily RNA polymerase sigma factor
SCNpilot_expt_1000_bf_scaffold_4693_13
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7839..8579
DNA (741bp) protein (247aa)
Transmembrane transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHN1_9PROT
Membrane protein {ECO:0000313|EMBL:GAO36861.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
transmembrane transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4693_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8651..9598
DNA (948bp) protein (316aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IF3_DECAR rbh
sulfite oxidase subunit YedY; K07147 rbh
SCNpilot_expt_1000_bf_scaffold_4693_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9608..10282
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IF4_DECAR
hypothetical protein
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_4693_16
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10377..13568
DNA (3192bp) protein (1064aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ3 RepID=UPI00037AABBD rbh
Uncharacterized protein {ECO:0000313|EMBL:KFX70035.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
diguanylate cyclase rbh
SCNpilot_expt_1000_bf_scaffold_4693_17
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13381..14370)
DNA (990bp) protein (330aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] rbh
Biotin synthase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJR6_ACCPU rbh
SCNpilot_expt_1000_bf_scaffold_4693_18
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14431..15135
DNA (705bp) protein (235aa)
Phosphoribosyltransferase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJR5_ACCPU rbh
phosphoribosyltransferase rbh
Phosphoribosyltransferase {ECO:0000313|EMBL:ACV33629.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_1000_bf_scaffold_4693_19
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15217..16998
DNA (1782bp) protein (594aa)
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMB7_AZOSU rbh
Lipid A core--O-antigen ligase-like protein rbh
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AEV25695.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_4693_20
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16995..18179)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMB6_AZOSU
Putative PEP-CTERM system TPR-repeat lipoprotein {ECO:0000313|EMBL:KFB76978.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein; K12284 MSHA biogenesis protein MshN
SCNpilot_expt_1000_bf_scaffold_4693_21
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18190..19113)
DNA (924bp) protein (308aa)
General secretion pathway protein, ATPase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HN1_DECAR rbh
Putative secretion ATPase, PEP-CTERM locus subfamily {ECO:0000313|EMBL:KFB74057.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
general secretion pathway protein, ATPase; K12283 MSHA biogenesis protein MshM rbh
Displaying 21 items

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